RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ZNF816Q0VGE8 651 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 GSG1LQ6UXU4 331 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 Q8N6K4 173 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 ZNF383Q8NA42 475 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 OR2T10Q8NGZ9 312 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 LHFPL5Q8TAF8 219 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 ASB13Q8WXK3 278 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 ZNF436Q9C0F3 470 aaPredicted RBP7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PLSCR3Q9NRY6 295 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 SLC35D1Q9NTN3 355 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 COMMD9Q9P000 198 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 C13orf42A0A1B0GVH6 325 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 C5orf51A6NDU8 294 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 H7C2Y5 167 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 S1PR2O95136 353 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 GAPDHP04406 335 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 GIPP09681 153 aaPredicted RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 CT45A6P0DMU7 189 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 CT45A5P0DMU8 189 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 CT45A7P0DMV0 189 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 RRASP10301 218 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 H2BFSP57053 126 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 ERVK-16P61578 105 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 EWSR1Q01844 656 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 THOC7Q6I9Y2 204 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 LINC00336Q6ZUF6 198 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 PDPNQ86YL7 162 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 SELENOHQ8IZQ5 122 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 RRNAD1Q96FB5 475 aaKnown RBP7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 NEURL2Q9BR09 285 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 ZNF580Q9UK33 172 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 WASHC3Q9Y3C0 194 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 TMED3Q9Y3Q3 217 aa7.36□□□□□ -1.23
SMARCB1-206ENST00000477836 IGHV1-3A0A0C4DH29 117 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 A0A0J9YWU9 116 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 H0YJW9 148 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 SIX6O95475 246 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 CRYZL1O95825 349 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 HSPB1P04792 205 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 HLA-GP17693 338 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 LPAR6P43657 344 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 F2RL1P55085 397 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 LINC00205P59089 165 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 RAP2BP61225 183 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 IAH1Q2TAA2 248 aaPredicted RBP7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 ZNF585BQ52M93 769 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 LYZL2Q7Z4W2 148 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 TCTE3Q8IZS6 198 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 OR5AN1Q8NGI8 311 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 FLYWCH2Q96CP2 140 aaKnown RBP7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 PLEKHA2Q9HB19 425 aa7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 RANGRFQ9HD47 186 aaPredicted RBP7.35□□□□□ -1.23
SMARCB1-206ENST00000477836 MARCH11A6NNE9 402 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 HPRT1P00492 218 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 MOSP00540 346 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 IGKV1-39P01597 117 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 IGKV1-5P01602 117 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 IGHV3-11P01762 117 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 IGKV1D-39P04432 117 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 MC5RP33032 325 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 CD81P60033 236 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 CYCSP99999 105 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 FAM219AQ8IW50 185 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 DEFB125Q8N687 156 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 DMBX1Q8NFW5 382 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 OR2T35Q8NGX2 323 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 ST6GAL2Q96JF0 529 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 C2orf50Q96LR7 162 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 HARBI1Q96MB7 349 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 FYTTD1Q96QD9 318 aaKnown RBP7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 PARP11Q9NR21 331 aa7.34□□□□□ -1.23
SMARCB1-206ENST00000477836 TRAV41A0A0B4J266 112 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 IZUMO1RA6ND01 250 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 MPTX1A8MV57 137 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 ATP6V0E1O15342 81 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 OR2A4O95047 310 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 HRASP01112 189 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 KRASP01116 189 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 HNRNPCP07910 306 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 PET100P0DJ07 73 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 NQO2P16083 231 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 G6PCP35575 357 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 CD300CQ08708 224 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 SMCO1Q147U7 214 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 ZFP69Q49AA0 526 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 LRRC37A5PQ49AS3 106 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 H2BFWTQ7Z2G1 175 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 OSR1Q8TAX0 266 aaPredicted RBP7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 LSM10Q969L4 123 aaKnown RBP7.33□□□□□ -1.24
SMARCB1-206ENST00000477836 PPP1R14BQ96C90 147 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms