RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FAM25EA8MYX2 175 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 P0C879 139 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 TRAPPC2P0DI81 140 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 TRAPPC2BP0DI82 140 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 FCN2Q15485 313 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 THOC7Q6I9Y2 204 aaKnown RBP13.62□□□□□ -0.23
PTPN7-209ENST00000477554 MRAPQ8TCY5 172 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
PTPN7-209ENST00000477554 GPR146Q96CH1 333 aa13.62□□□□□ -0.23
PTPN7-209ENST00000477554 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 CCSO14618 274 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 SNAPC5O75971 98 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 KBTBD11O94819 623 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 TRGV3P03979 118 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 IL6RP08887 468 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-209ENST00000477554 BCAP31P51572 246 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 RUNX1Q01196 453 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-209ENST00000477554 DCUN1D4Q92564 292 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 DLX4Q92988 240 aaPredicted RBP13.61□□□□□ -0.23
PTPN7-209ENST00000477554 PDCD10Q9BUL8 212 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 ZNF355PQ9NSJ1 428 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 COA4Q9NYJ1 87 aa13.61□□□□□ -0.23
PTPN7-209ENST00000477554 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 FGF2P09038 288 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 LGALS1P09382 135 aaKnown RBP13.6□□□□□ -0.23
PTPN7-209ENST00000477554 CYCSP99999 105 aaKnown RBP13.6□□□□□ -0.23
PTPN7-209ENST00000477554 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 SMCO1Q147U7 214 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 IAH1Q2TAA2 248 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-209ENST00000477554 OR11H7Q8NGC8 314 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 OR4A16Q8NH70 328 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 TMEM167AQ8TBQ9 72 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 CHAC2Q8WUX2 184 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-209ENST00000477554 CACFD1Q9UGQ2 172 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 COL7A1Q02388 2944 aa13.6□□□□□ -0.23
PTPN7-209ENST00000477554 UPK2O00526 184 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 OR9G9P0C7N8 305 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 CXCL3P19876 107 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 MMD2Q8IY49 270 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 OR10C1Q96KK4 312 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 FKBP11Q9NYL4 201 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 PRNDQ9UKY0 176 aa13.59□□□□□ -0.23
PTPN7-209ENST00000477554 CGB1A6NKQ9 187 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 MPTX1A8MV57 137 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 TEX22C9J3V5 150 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 H2BFSP57053 126 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 OR1S1Q8NH92 325 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 NMES1Q9C002 83 aa13.58□□□□□ -0.24
PTPN7-209ENST00000477554 ZNF436Q9C0F3 470 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-209ENST00000477554 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 C15orf61A6NNL5 157 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 SEC14L6B5MCN3 397 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 SIX6O95475 246 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 MAS1LP35410 378 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 RPL8P62917 257 aaKnown RBP13.57□□□□□ -0.24
PTPN7-209ENST00000477554 IZUMO4Q1ZYL8 232 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 Q6ZRM9 215 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 ZNF429Q86V71 674 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 ZBTB8BQ8NAP8 495 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-209ENST00000477554 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 GSKIPQ9P0R6 139 aa13.57□□□□□ -0.24
PTPN7-209ENST00000477554 PITX3O75364 302 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 ACTL6BO94805 426 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-209ENST00000477554 AREGP15514 252 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 PRR25Q96S07 402 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 NSG2Q9Y328 171 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 FAM90A26D6RGX4 464 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 LINC01619G3V211 115 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 OR8U8P0C7N1 319 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
PTPN7-209ENST00000477554 REG1AP05451 166 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 NKX2-1P43699 371 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-209ENST00000477554 OR2B8PP59922 312 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 RAP2BP61225 183 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 REC114Q7Z4M0 266 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 OR5B3Q8NH48 314 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 OR52E5Q8NH55 327 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 DPF1Q92782 380 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 FYTTD1Q96QD9 318 aaKnown RBP13.55□□□□□ -0.24
PTPN7-209ENST00000477554 QTRT1Q9BXR0 403 aaKnown RBP13.55□□□□□ -0.24
PTPN7-209ENST00000477554 SLA2Q9H6Q3 261 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
PTPN7-209ENST00000477554 OVOL1O14753 267 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 ST8SIA3O43173 380 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 CCNKO75909 580 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 IFNA17P01571 189 aa13.54□□□□□ -0.24
PTPN7-209ENST00000477554 HSPB1P04792 205 aaKnown RBP13.54□□□□□ -0.24
PTPN7-209ENST00000477554 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms