RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CIB3Q96Q77 187 aaPredicted RBP12.68□□□□□ -0.38
VHL-203ENST00000477538 ZFP57Q9NU63 452 aa12.68□□□□□ -0.38
VHL-203ENST00000477538 TMEM89A2RUT3 159 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 CRYGCP07315 174 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 SNCAP37840 140 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 PROK1P58294 105 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 C10orf99Q6UWK7 81 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 C19orf35Q6ZS72 473 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 ZNF114Q8NC26 417 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 PPP1R1CQ8WVI7 109 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 RAB40CQ96S21 281 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 ZNF355PQ9NSJ1 428 aa12.67□□□□□ -0.38
VHL-203ENST00000477538 HAX1O00165 279 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 LY86O95711 162 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 IGLV1-40P01703 118 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 IGHG4P01861 327 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 DEFA4P12838 97 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 RAP2BP61225 183 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 CD83Q01151 205 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 SLC24A4Q8NFF2 622 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 P2RX4Q99571 388 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
VHL-203ENST00000477538 F11RQ9Y624 299 aaKnown RBP12.66□□□□□ -0.38
VHL-203ENST00000477538 H3BUA1 57 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 L7N2F9 121 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 DEDDO75618 318 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 MPC2O95563 127 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 IFNA10P01566 189 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 PRH1P02810 166 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 RLN2P04090 185 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 PET100P0DJ07 73 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 RNASE2P10153 161 aaKnown RBP12.65□□□□□ -0.38
VHL-203ENST00000477538 PF4V1P10720 104 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 PVALBP20472 110 aaPredicted RBP12.65□□□□□ -0.38
VHL-203ENST00000477538 HTR2BP41595 481 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 SUB1P53999 127 aaKnown RBP eCLIP12.65□□□□□ -0.38
VHL-203ENST00000477538 VAMP2P63027 116 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 BSXQ3C1V8 233 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 OR5AU1Q8NGC0 362 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 OR1P1Q8NH06 330 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
VHL-203ENST00000477538 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 PSENENQ9NZ42 101 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 U3KQ87 197 aa12.65□□□□□ -0.38
VHL-203ENST00000477538 H3BP45 60 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 CYB5BO43169 146 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 TMEM50AO95807 157 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 ELANEP08246 267 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 NPY1RP25929 384 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 MFAP2P55001 183 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 PAX9P55771 341 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 TAS2R30P59541 319 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 RPL23AP62750 156 aaKnown RBP12.64□□□□□ -0.39
VHL-203ENST00000477538 FOXE3Q13461 319 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 C2orf83Q53S99 150 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 AWAT1Q58HT5 328 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 SLC25A24Q6NUK1 477 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 OR4X2Q8NGF9 303 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 OR1L6Q8NGR2 347 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
VHL-203ENST00000477538 RANGRFQ9HD47 186 aaPredicted RBP12.64□□□□□ -0.39
VHL-203ENST00000477538 IGLV11-55A0A075B6I3 123 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 H0YIZ8 118 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 BRI3O95415 125 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 TRGV3P03979 118 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 HIST1H1BP16401 226 aaKnown RBP12.63□□□□□ -0.39
VHL-203ENST00000477538 PSMB8P28062 276 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 TPPP2P59282 170 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
VHL-203ENST00000477538 SPANXN5Q5MJ07 72 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 OR2T35Q8NGX2 323 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 FANCD2OSQ96PS1 177 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 SLA2Q9H6Q3 261 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 OR5AC2Q9NZP5 309 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
VHL-203ENST00000477538 DMRT1Q9Y5R6 373 aa12.63□□□□□ -0.39
VHL-203ENST00000477538 TRAV14DV4A0A0A6YYC5 116 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 TRBV9A0A0B4J1U6 114 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 E5RGE8 158 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 TSC22D2O75157 780 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 CCNKO75909 580 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 OR2J3O76001 311 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
VHL-203ENST00000477538 RIPPLY3P57055 190 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 DEFA5Q01523 94 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 FGL1Q08830 312 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 KLK9Q2XQG4 91 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 PRSS54Q6PEW0 395 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 THAP6Q8TBB0 222 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 TMEM170AQ8WVE7 144 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 WFDC12Q8WWY7 111 aa12.62□□□□□ -0.39
VHL-203ENST00000477538 MISP3Q96FF7 219 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms