RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ATP5G2Q06055 141 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 WT1-ASQ06250 92 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 IZUMO4Q1ZYL8 232 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 C4orf46Q504U0 113 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 LYZL2Q7Z4W2 148 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 LYG2Q86SG7 212 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 WFDC9Q8NEX5 89 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 OR10W1Q8NGF6 305 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 ENKURQ8TC29 256 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 GPR146Q96CH1 333 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 P2RX4Q99571 388 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 CACNG5Q9UF02 275 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 FLVCR2Q9UPI3 526 aa10.18□□□□□ -0.78
TOP3A-205ENST00000477508 A0A0G2JRQ6 117 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 HSPB1P04792 205 aaKnown RBP10.17□□□□□ -0.78
TOP3A-205ENST00000477508 REG1AP05451 166 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 OR8U8P0C7N1 319 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 SLC25A6P12236 298 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 ANXA7P20073 488 aaKnown RBP10.17□□□□□ -0.78
TOP3A-205ENST00000477508 ZNF616Q08AN1 781 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 DHRS2Q13268 280 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 SMCO1Q147U7 214 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 ANKRD55Q3KP44 614 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 PDLIM3Q53GG5 364 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-205ENST00000477508 NMSQ5H8A3 153 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 ZNF343Q6P1L6 599 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 Q6ZRM9 215 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 OR11H1Q8NG94 326 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 OR1N2Q8NGR9 330 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 CXorf58Q96LI9 332 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 RANGRFQ9HD47 186 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-205ENST00000477508 ENY2Q9NPA8 101 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 NUDT15Q9NV35 164 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
TOP3A-205ENST00000477508 F11RQ9Y624 299 aaKnown RBP10.17□□□□□ -0.78
TOP3A-205ENST00000477508 IGLV11-55A0A075B6I3 123 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 OR2J3O76001 311 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 IGHV3-11P01762 117 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 PRH1P02810 166 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 CD33P20138 364 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
TOP3A-205ENST00000477508 IFITM3Q01628 133 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 FHL3Q13643 280 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 C15orf32Q32M92 178 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 ETV3LQ6ZN32 361 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 OR2C3Q8N628 320 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 DUSP18Q8NEJ0 188 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 OR1P1Q8NH06 330 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 OR5B12Q96R08 314 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 PRR13Q9NZ81 148 aa10.16□□□□□ -0.78
TOP3A-205ENST00000477508 TRAV6A0A075B6T7 132 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 LINC01619G3V211 115 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 IFNA21P01568 189 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 ZP3P21754 424 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 SNCAP37840 140 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 HOXA1P49639 335 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-205ENST00000477508 DEFB136Q30KP8 78 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 SLC25A24Q6NUK1 477 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 MITD1Q8WV92 249 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 EEF1AKMT3Q96AZ1 226 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 MCRIP2Q9BUT9 160 aaKnown RBP10.15□□□□□ -0.78
TOP3A-205ENST00000477508 GPR61Q9BZJ8 451 aa10.15□□□□□ -0.78
TOP3A-205ENST00000477508 PEF1Q9UBV8 284 aaKnown RBP10.15□□□□□ -0.78
TOP3A-205ENST00000477508 TRBV7-1A0A0A6YYK4 115 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 FAM90A26D6RGX4 464 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 EXOSC2Q13868 293 aaKnown RBP10.14□□□□□ -0.79
TOP3A-205ENST00000477508 PLET1Q6UQ28 207 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 NOXA1Q86UR1 476 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 OR1S1Q8NH92 325 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 RCC1LQ96I51 464 aaKnown RBP10.14□□□□□ -0.79
TOP3A-205ENST00000477508 ATP6V0BQ99437 205 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 NOTCH3Q9UM47 2321 aa10.14□□□□□ -0.79
TOP3A-205ENST00000477508 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.13□□□□□ -0.79
TOP3A-205ENST00000477508 CEBPZOSA8MTT3 80 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 CORTO00230 105 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 NDUFB8O95169 186 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 IL5P05113 134 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 HOXB5P09067 269 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 HTR2BP41595 481 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PRR20EP86478 221 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PRR20CP86479 221 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PRR20DP86480 221 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PRR20BP86481 221 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PRR20AP86496 221 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 TNFRSF9Q07011 255 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 TATDN3Q17R31 274 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 NRARPQ7Z6K4 114 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 ZNF431Q8TF32 576 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-205ENST00000477508 DUX3Q96PT4 197 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 PALMDQ9NP74 551 aa10.13□□□□□ -0.79
TOP3A-205ENST00000477508 HEYLQ9NQ87 328 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms