RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ZNF767PQ75MW2 155 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 LSM10Q969L4 123 aaKnown RBP4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 SLC25A46Q96AG3 418 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 PINX1Q96BK5 328 aaKnown RBP4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 SRSF8Q9BRL6 282 aaKnown RBP4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 DCSTAMPQ9H295 470 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 SMPXQ9UHP9 88 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 OR51B2Q9Y5P1 312 aa4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 F11RQ9Y624 299 aaKnown RBP4.88□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAV14DV4A0A0A6YYC5 116 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAV1-2A0A0B4J238 106 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 MEIS3P1A6NDR6 274 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 A6NHS1 94 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 MARCH11A6NNE9 402 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 EBAG9O00559 213 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 SSX5O60225 188 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 GNG7O60262 68 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 KRASP01116 189 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 PPYP01298 95 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 RLN1P04808 185 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 HERV-K104P61576 105 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 KLK9Q2XQG4 91 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 OGFRL1Q5TC84 451 aaPredicted RBP4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 PVRIGQ6DKI7 326 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 HSD17B13Q7Z5P4 300 aaPredicted RBP4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 BEST4Q8NFU0 473 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 STXBP6Q8NFX7 210 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 OR1L8Q8NGR8 309 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 GINS3Q9BRX5 216 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 DAPK2Q9UIK4 370 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 KLK9Q9UKQ9 250 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 ETV7Q9Y603 341 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 HERC2O95714 4834 aa4.87□□□□□ -1.63
RTFDC1-206ENST00000477485 IGLV2-18A0A075B6J9 118 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 TRAV18A0A075B6X5 111 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 K7EIM0 57 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 RBFOX2O43251 390 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 SCGNO76038 276 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 IFNA10P01566 189 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 CTSGP08311 255 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 P0DMU3 169 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 FAM231AP0DMU4 169 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 FAM231CP0DMU5 169 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 G6PCP35575 357 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 LPAR6P43657 344 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 MFAP4P55083 255 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF818PQ6ZRF7 136 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 TPRA1Q86W33 373 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 Q8NAQ8 132 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 ZBTB34Q8NCN2 500 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 LGALS14Q8TCE9 139 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 ST8SIA2Q92186 375 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM56Q96MV1 263 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 MS4A6AQ9H2W1 248 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 PLEKHA2Q9HB19 425 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 IFT46Q9NQC8 304 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 CLEC5AQ9NY25 188 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 COMMD9Q9P000 198 aa4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 RRP15Q9Y3B9 282 aaKnown RBP4.86□□□□□ -1.63
RTFDC1-206ENST00000477485 A0A1B0GVY2 172 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 TRDV1A0A1B0GX56 115 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 KNCNA6PVL3 124 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 F8W735 103 aaPredicted RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 DFFBO76075 338 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 MT-CO2P00403 227 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 APOHP02749 345 aaPredicted RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF688P0C7X2 276 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 RBMY1A1P0DJD3 496 aaKnown RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 RBMY1CP0DJD4 496 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 MIFP14174 115 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 AQP4P55087 323 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 MXD1Q05195 221 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 POU2AF1Q16633 256 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 ACTL10Q5JWF8 245 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF773Q6PK81 442 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF367Q7RTV3 350 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 PRSS48Q7RTY5 328 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 ZNF575Q86XF7 245 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 FAM24BQ8N5W8 94 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 BORCS5Q969J3 196 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 MOB3AQ96BX8 217 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 DGCR14Q96DF8 476 aaKnown RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 NDUFAF3Q9BU61 184 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 NXF2Q9GZY0 626 aaKnown RBP4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 DUSP21Q9H596 190 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 TMEM231Q9H6L2 316 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 NDUFA4L2Q9NRX3 87 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 NDUFB11Q9NX14 153 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 RHBDL2Q9NX52 303 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 EHFQ9NZC4 300 aa4.85□□□□□ -1.63
RTFDC1-206ENST00000477485 TBC1D24Q9ULP9 559 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms