RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TIMM9Q9Y5J7 89 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 IGHV3-72A0A0B4J1Y9 119 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 DNAJC9-AS1A6NH13 148 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 TCF21O43680 179 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 VENTXO95231 258 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 CT45A6P0DMU7 189 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 CT45A5P0DMU8 189 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 CT45A7P0DMV0 189 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 LINC00205P59089 165 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 SPCS3P61009 180 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 TAGLNQ01995 201 aaKnown RBP13.49□□□□□ -0.25
EPHB4-204ENST00000477446 SLC38A11Q08AI6 406 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 HABP2Q14520 560 aaPredicted RBP13.49□□□□□ -0.25
EPHB4-204ENST00000477446 OR4A16Q8NH70 328 aa13.49□□□□□ -0.25
EPHB4-204ENST00000477446 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
EPHB4-204ENST00000477446 NF1P21359 2839 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 TRAV1-1A0A0B4J248 108 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 CEBPZOSA8MTT3 80 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 AGPAT2O15120 278 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 SFTA3P0C7M3 94 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 ADCYAP1P18509 176 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 ARL16Q0P5N6 197 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 FBLN7Q53RD9 439 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
EPHB4-204ENST00000477446 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
EPHB4-204ENST00000477446 OR10P1Q8NGE3 313 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 OR5R1Q8NH85 324 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 RBMXL1Q96E39 390 aaKnown RBP13.48□□□□□ -0.25
EPHB4-204ENST00000477446 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
EPHB4-204ENST00000477446 TMEM231Q9H6L2 316 aa13.48□□□□□ -0.25
EPHB4-204ENST00000477446 HRASP01112 189 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 SNRNP70P08621 437 aaKnown RBP13.47□□□□□ -0.25
EPHB4-204ENST00000477446 FHITP49789 147 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 RIPPLY3P57055 190 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 LY6EQ16553 131 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 DHRS7BQ6IAN0 325 aaPredicted RBP13.47□□□□□ -0.25
EPHB4-204ENST00000477446 HAPLN4Q86UW8 402 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 ZNF429Q86V71 674 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 TMEM86BQ8N661 226 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 ZNF383Q8NA42 475 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 TMEM147Q9BVK8 224 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 SCRT1Q9BWW7 348 aa13.47□□□□□ -0.25
EPHB4-204ENST00000477446 EIF5A2Q9GZV4 153 aaKnown RBP13.47□□□□□ -0.25
EPHB4-204ENST00000477446 CLDN34H7C241 214 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 SOX15O60248 233 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 CD1BP29016 333 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 ATRAIDQ6UW56 229 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 OR4C12Q96R67 309 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 KIAA1456Q9P272 454 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 VPREB3Q9UKI3 123 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
EPHB4-204ENST00000477446 H0YJW9 148 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 IFNA17P01571 189 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 IGKV1D-33P01593 117 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 IGKV1-33P01594 117 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 FAM106CPP0CH98 169 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
EPHB4-204ENST00000477446 RUNX1Q01196 453 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 OR5AN1Q8NGI8 311 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 TAF15Q92804 592 aaKnown RBP eCLIP13.45□□□□□ -0.26
EPHB4-204ENST00000477446 JMJD1CQ15652 2540 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 A6NDX4 124 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 DNASE2O00115 360 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-204ENST00000477446 MBP02144 154 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 OR9G9P0C7N8 305 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 EBI3Q14213 229 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 HES1Q14469 280 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 GUCA2BQ16661 112 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 VWC2Q2TAL6 325 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 SPSB3Q6PJ21 355 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 TMEM219Q86XT9 240 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-204ENST00000477446 MBD3L1Q8WWY6 194 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 GGACTQ9BVM4 153 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 QTRT1Q9BXR0 403 aaKnown RBP13.45□□□□□ -0.26
EPHB4-204ENST00000477446 SLC35B3Q9H1N7 401 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 FBXO7Q9Y3I1 522 aa13.45□□□□□ -0.26
EPHB4-204ENST00000477446 MC5RP33032 325 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 RELBQ01201 579 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 HNF4GQ14541 408 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 RTL8BQ17RB0 113 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 OR8G2PQ6IF36 304 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
EPHB4-204ENST00000477446 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 PITPNC1Q9UKF7 332 aa13.44□□□□□ -0.26
EPHB4-204ENST00000477446 RBFOX3A6NFN3 312 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 MOSP00540 346 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
EPHB4-204ENST00000477446 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 OR2T10Q8NGZ9 312 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
EPHB4-204ENST00000477446 H7C2Y5 167 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 APOA2P02652 100 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 TMEM11P17152 192 aa13.42□□□□□ -0.26
EPHB4-204ENST00000477446 PPT1P50897 306 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms