RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL4A6-206ENST00000477085 NCBP2LA6PVI3 153 aaKnown RBP11.48□□□□□ -0.57
COL4A6-206ENST00000477085 TEX46H3BTG2 121 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 IFNA4P05014 189 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 BRS3P32247 399 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 FHITP49789 147 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 ATP6V1FQ16864 119 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 COMMD7Q86VX2 200 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 Q8N9W7 124 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 RNF141Q8WVD5 230 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 SRSF12Q8WXF0 261 aaKnown RBP11.48□□□□□ -0.57
COL4A6-206ENST00000477085 P2RX4Q99571 388 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 TMEM147Q9BVK8 224 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 UQCC1Q9NVA1 299 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
COL4A6-206ENST00000477085 ITPR3Q14573 2671 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 A0A1W2PN81 502 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 J3QLI3 93 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 ACTL6BO94805 426 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 IFNA5P01569 189 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 CHRNA7P36544 502 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 MFAP2P55001 183 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 RAB11AP62491 216 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
COL4A6-206ENST00000477085 ARSJQ5FYB0 599 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-206ENST00000477085 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
COL4A6-206ENST00000477085 TAF15Q92804 592 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL4A6-206ENST00000477085 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
COL4A6-206ENST00000477085 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
COL4A6-206ENST00000477085 NDPQ00604 133 aa11.46□□□□□ -0.57
COL4A6-206ENST00000477085 BCL6BQ8N143 479 aaPredicted RBP11.46□□□□□ -0.57
COL4A6-206ENST00000477085 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
COL4A6-206ENST00000477085 FOXC2Q99958 501 aa11.46□□□□□ -0.57
COL4A6-206ENST00000477085 MED9Q9NWA0 146 aa11.46□□□□□ -0.57
COL4A6-206ENST00000477085 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.57
COL4A6-206ENST00000477085 MDFIC2A0A1B0GVS7 189 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 FSHBP01225 129 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 SNCAP37840 140 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 CX3CL1P78423 397 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 FXYD3Q14802 87 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 PVRIGQ6DKI7 326 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 TMEM182Q6ZP80 229 aaPredicted RBP11.46□□□□□ -0.58
COL4A6-206ENST00000477085 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 SSMEM1Q8WWF3 244 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 FAM103A1Q9BTL3 118 aaKnown RBP11.46□□□□□ -0.58
COL4A6-206ENST00000477085 GGACTQ9BVM4 153 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.58
COL4A6-206ENST00000477085 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-206ENST00000477085 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-206ENST00000477085 DLK1P80370 383 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 ZNF562Q6V9R5 426 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 CENPVQ7Z7K6 275 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-206ENST00000477085 TMEM219Q86XT9 240 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 GNPNAT1Q96EK6 184 aaPredicted RBP11.45□□□□□ -0.58
COL4A6-206ENST00000477085 SSX3Q99909 188 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 VSIRQ9H7M9 311 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
COL4A6-206ENST00000477085 IGHV7-81A0A0B4J1V7 117 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 CNIH1O95406 144 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 FGF7P21781 194 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-206ENST00000477085 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 C22orf15Q8WYQ4 148 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 HSPB9Q9BQS6 159 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 FNDC4Q9H6D8 234 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-206ENST00000477085 FAM96BQ9Y3D0 163 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 SH2D7A6NKC9 451 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-206ENST00000477085 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
COL4A6-206ENST00000477085 AMY1AP04745 511 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 AANATQ16613 207 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 BTNL8Q6UX41 500 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 ZNF114Q8NC26 417 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 NPCDR1Q9BY65 106 aa11.44□□□□□ -0.58
COL4A6-206ENST00000477085 LSM4Q9Y4Z0 139 aaKnown RBP11.44□□□□□ -0.58
COL4A6-206ENST00000477085 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 NAV3Q8IVL0 2385 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 SCAF4O95104 1147 aaKnown RBP11.43□□□□□ -0.58
COL4A6-206ENST00000477085 CD69Q07108 199 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 GAMTQ14353 236 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 PXDC1Q5TGL8 231 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 OR2T6Q8NHC8 308 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 LRRC20Q8TCA0 184 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 SAT2Q96F10 170 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-206ENST00000477085 RBM14Q96PK6 669 aaKnown RBP11.43□□□□□ -0.58
COL4A6-206ENST00000477085 MGST2Q99735 147 aa11.43□□□□□ -0.58
COL4A6-206ENST00000477085 PSMG3Q9BT73 122 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-206ENST00000477085 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
COL4A6-206ENST00000477085 IGKV1OR2-108A0A075B7D4 117 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 FBP1P09467 338 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
COL4A6-206ENST00000477085 ACSM6Q6P461 480 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms