RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 PLIN4Q96Q06 1357 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 DOCK8Q8NF50 2099 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 RBAKDNA6NC62 111 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM202A6NGA9 273 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 DUSP14O95147 198 aaKnown RBP4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 RBP4P02753 201 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 IGLL1P15814 213 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 ATP4BP51164 291 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 LINC00310P59036 64 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 TAS2R19P59542 299 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 SEC11AP67812 179 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 FUT5Q11128 374 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 MSMO1Q15800 293 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 C12orf74Q32Q52 190 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 SLC22A24Q8N4F4 322 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 OR52P1PQ8NH57 321 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM191AQ9H0A3 160 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 C16orf95Q9H693 158 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF257Q9Y2Q1 563 aa4.8□□□□□ -1.64
SPTLC3-205ENST00000476791 NINQ8N4C6 2090 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 POLR2AP24928 1970 aaKnown RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TRDV1A0A1B0GX56 115 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TLCD2A6NGC4 264 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 CDX4O14627 284 aaPredicted RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF737O75373 536 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 GRAP2O75791 330 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ARL6IP5O75915 188 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 PROSCO94903 275 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 APOMO95445 188 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 SLC2A10O95528 541 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 LINC00032P0C843 101 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 CR2P20023 1033 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF90Q03938 601 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 MED12LQ86YW9 2145 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF799Q96GE5 643 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 KAZALD1Q96I82 304 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM242Q9NWH2 141 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 HHLA3Q9XRX5 114 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF256Q9Y2P7 627 aaPredicted RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 CICQ96RK0 1608 aaPredicted RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TULP4Q9NRJ4 1543 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TDRD15B5MCY1 1934 aaKnown RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 SHISA9B4DS77 424 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM262E9PQX1 116 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 NAPSAO96009 420 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 HLA-DRB3P79483 266 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 CSRP2Q16527 193 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 KLF17Q5JT82 389 aaPredicted RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 GTSCR1Q86UQ5 136 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 FBXL14Q8N1E6 418 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 OR8S1Q8NH09 359 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 TP53TG3Q9ULZ0 132 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 AMMECR1Q9Y4X0 333 aaPredicted RBP4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 ANKRD31Q8N7Z5 1873 aa4.79□□□□□ -1.64
SPTLC3-205ENST00000476791 RBBP6Q7Z6E9 1792 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 NUP210Q8TEM1 1887 aaPredicted RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 hCG_1818297A0A087WSY0 165 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 A8MT66 165 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 RPS4Y1P22090 263 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 CBLN1P23435 193 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 KLF9Q13886 244 aaPredicted RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 UNQ9165/PRO28630Q6UXU0 137 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 STPG3Q8N7X2 389 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 OLIG1Q8TAK6 271 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 NABP1Q96AH0 204 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 LINC00526Q96FQ7 95 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 PGLYRP2Q96PD5 576 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 AAMDCQ9H7C9 122 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 NOP16Q9Y3C1 178 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 MYOM1P52179 1685 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 PARP4Q9UKK3 1724 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TRAV27A0A087WT01 109 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TRAV9-2A0A087WT02 112 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 A0A1B0GWB2 263 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 DPRXA6NFQ7 191 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 A6NIN4 97 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 OR5AL1P0C617 328 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 PPP1CCP36873 323 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 PSMB3P49720 205 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TAS2R45P59539 299 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 RNASE12Q5GAN4 147 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 LEG1Q6P5S2 330 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM207Q6UWW9 146 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM179BQ7Z7N9 219 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 C11orf53Q8IXP5 236 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 LY6G5BQ8NDX9 201 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 RPS4Y2Q8TD47 263 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 FGF14Q92915 247 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 TVP23CQ96ET8 276 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 MANBALQ9NQG1 85 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 COQ4Q9Y3A0 265 aa4.78□□□□□ -1.64
SPTLC3-205ENST00000476791 FMN2Q9NZ56 1722 aa4.77□□□□□ -1.65
SPTLC3-205ENST00000476791 TNS2Q63HR2 1409 aa4.77□□□□□ -1.65
SPTLC3-205ENST00000476791 APOC4-APOC2K7ER74 178 aa4.77□□□□□ -1.65
SPTLC3-205ENST00000476791 M0R2P5 195 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms