RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 HOXA1P49639 335 aaPredicted RBP17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 RPL23AP62750 156 aaKnown RBP17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 C2orf68Q2NKX9 166 aa17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 KLK9Q2XQG4 91 aa17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 ZFP57Q9NU63 452 aa17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 KLK9Q9UKQ9 250 aa17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 TSSC4Q9Y5U2 329 aaPredicted RBP17.26■□□□□ 0.35
MCF2L2-209ENST00000475664 TRBV9A0A0B4J1U6 114 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 TPPP2P59282 170 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 IAH1Q2TAA2 248 aaPredicted RBP17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 KHDC1LQ5JSQ8 128 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 NDUFA11Q86Y39 141 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 ZNF114Q8NC26 417 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 OR4D5Q8NGN0 318 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 FANCD2OSQ96PS1 177 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 DMRT1Q9Y5R6 373 aa17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 F11RQ9Y624 299 aaKnown RBP17.25■□□□□ 0.35
MCF2L2-209ENST00000475664 IGLV11-55A0A075B6I3 123 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 CEBPZOSA8MTT3 80 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 ERHP84090 104 aaKnown RBP17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 ZNF491Q8N8L2 437 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 ZBTB8BQ8NAP8 495 aaPredicted RBP17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 RBKSQ9H477 322 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 ENY2Q9NPA8 101 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 ANK2Q01484 3957 aa17.24■□□□□ 0.35
MCF2L2-209ENST00000475664 C13orf42A0A1B0GVH6 325 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 DEFA4P12838 97 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 CDX1P47902 265 aaPredicted RBP17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 MFAP2P55001 183 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 RHOGP84095 191 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 DEFA5Q01523 94 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 UBE2E2Q96LR5 201 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 P2RX4Q99571 388 aa17.23■□□□□ 0.35
MCF2L2-209ENST00000475664 C5orf51A6NDU8 294 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 FAM25EA8MYX2 175 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 SSNA1O43805 119 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 OR2J3O76001 311 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 HIST1H1BP16401 226 aaKnown RBP17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 ID3Q02535 119 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 BSXQ3C1V8 233 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 C11orf87Q6NUJ2 197 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 GSG1LQ6UXU4 331 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 C18orf65Q6ZTR6 163 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 OR1P1Q8NH06 330 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 DTD1Q8TEA8 209 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 C2orf50Q96LR7 162 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 GNB4Q9HAV0 340 aa17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 HEYLQ9NQ87 328 aaPredicted RBP17.22■□□□□ 0.35
MCF2L2-209ENST00000475664 A0A1W2PRX2 142 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 FAM223BA6NKX1 122 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 GOSR2O14653 212 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 RNASE2P10153 161 aaKnown RBP17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 NKX2-1P43699 371 aaPredicted RBP17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 NSUN5P1Q3KNT7 163 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 FAM223AQ8IWN6 122 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 NECAP1Q8NC96 275 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 OR1L6Q8NGR2 347 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 USMG5Q96IX5 58 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
MCF2L2-209ENST00000475664 MED6O75586 246 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 SNCAP37840 140 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 KLHL30-AS1Q8NEE0 82 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 MAGT1Q9H0U3 335 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 HIPK2Q9H2X6 1198 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 FBXL7Q9UJT9 491 aa17.2■□□□□ 0.34
MCF2L2-209ENST00000475664 A0A0G2JLM5 398 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 CYB5BO43169 146 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 SYNGR2O43760 224 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 NDUFB8O95169 186 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 SIX6O95475 246 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 IL15RAQ13261 267 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 PVRIGQ6DKI7 326 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 SLC25A24Q6NUK1 477 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 C4orf3Q8WVX3 66 aa17.19■□□□□ 0.34
MCF2L2-209ENST00000475664 NUDT19A8MXV4 375 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 HTR2BP41595 481 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 POLR2GP62487 172 aaKnown RBP eCLIP17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 C15orf32Q32M92 178 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 SLC24A4Q8NFF2 622 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 THYN1Q9P016 225 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 MGAT4CQ9UBM8 478 aa17.18■□□□□ 0.34
MCF2L2-209ENST00000475664 SCGB1D2O95969 90 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 IGHV3-11P01762 117 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 MBPP02686 304 aaPredicted RBP17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 IAPPP10997 89 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 SUB1P53999 127 aaKnown RBP eCLIP17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 H2BFSP57053 126 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 RUNX1Q01196 453 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 ATP5G2Q06055 141 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 C8orf86Q6ZUL3 223 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 TMEM170AQ8WVE7 144 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 OR5B12Q96R08 314 aa17.17■□□□□ 0.34
MCF2L2-209ENST00000475664 I3L521 148 aa17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 LGALS1P09382 135 aaKnown RBP17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 C2orf83Q53S99 150 aa17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 CIB3Q96Q77 187 aaPredicted RBP17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 RCL1Q9Y2P8 373 aaKnown RBP17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 U3KQ87 197 aa17.16■□□□□ 0.34
MCF2L2-209ENST00000475664 MFSD2BA6NFX1 497 aa17.15■□□□□ 0.34
MCF2L2-209ENST00000475664 K7EIM0 57 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms