RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
MCF2L-224ENST00000475524 WSB1Q9Y6I7 421 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 U3KQ87 197 aa11.88□□□□□ -0.51
MCF2L-224ENST00000475524 K7EPK0 472 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 CORTO00230 105 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 SNCAP37840 140 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 FGL1Q08830 312 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 CENPVQ7Z7K6 275 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 WFDC12Q8WWY7 111 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 SMIM8Q96KF7 97 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
MCF2L-224ENST00000475524 NF1P21359 2839 aa11.87□□□□□ -0.51
MCF2L-224ENST00000475524 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 SOX15O60248 233 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 TSC22D2O75157 780 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 RLN2P04090 185 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-224ENST00000475524 PSMB8P28062 276 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 RAB32Q13637 225 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 KLHDC1Q8N7A1 406 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 SLC24A4Q8NFF2 622 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 OR4X2Q8NGF9 303 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 THYN1Q9P016 225 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 LINC00527Q9UJ94 153 aa11.86□□□□□ -0.51
MCF2L-224ENST00000475524 IGLV11-55A0A075B6I3 123 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 DEDDO75618 318 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 NXPH3O95157 252 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 RNASE2P10153 161 aaKnown RBP11.85□□□□□ -0.51
MCF2L-224ENST00000475524 NPY1RP25929 384 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 BCAP31P51572 246 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 MYOZ3Q8TDC0 251 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 P2RX4Q99571 388 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
MCF2L-224ENST00000475524 FAM223BA6NKX1 122 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 L7N2F9 121 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 SSSCA1O60232 199 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 MPC2O95563 127 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 DEFA4P12838 97 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 LYL1P12980 280 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 S100A10P60903 97 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
MCF2L-224ENST00000475524 VAMP2P63027 116 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 AWAT1Q58HT5 328 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 FAM209BQ5JX69 171 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 FAM223AQ8IWN6 122 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 NECAP1Q8NC96 275 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 OR5T1Q8NG75 326 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 OR5AU1Q8NGC0 362 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
MCF2L-224ENST00000475524 USMG5Q96IX5 58 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 FANCD2OSQ96PS1 177 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 ATP6V0BQ99437 205 aa11.84□□□□□ -0.51
MCF2L-224ENST00000475524 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
MCF2L-224ENST00000475524 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-224ENST00000475524 A0A0G2JLM5 398 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 E5RGE8 158 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 IFNA10P01566 189 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 REG1AP05451 166 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 APELAP0DMC3 54 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 PAX9P55771 341 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 RAB11AP62491 216 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 EXOSC2Q13868 293 aaKnown RBP11.83□□□□□ -0.52
MCF2L-224ENST00000475524 PRSS54Q6PEW0 395 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 TMEM65Q6PI78 240 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 ZNF329Q86UD4 541 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 TAF15Q92804 592 aaKnown RBP eCLIP11.83□□□□□ -0.52
MCF2L-224ENST00000475524 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
MCF2L-224ENST00000475524 ZFHX3Q15911 3703 aa11.83□□□□□ -0.52
MCF2L-224ENST00000475524 TMEM50AO95807 157 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 PF4V1P10720 104 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 IAPPP10997 89 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 RAB9AP51151 201 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 KRTAP21-3Q3LHN1 58 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-224ENST00000475524 CUBNO60494 3623 aa11.82□□□□□ -0.52
MCF2L-224ENST00000475524 C15orf62A8K5M9 175 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 TRGV3P03979 118 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 P2RY1P47900 373 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 MFAP2P55001 183 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 RHOGP84095 191 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 CD83Q01151 205 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 LRRC37A5PQ49AS3 106 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
MCF2L-224ENST00000475524 OR2T35Q8NGX2 323 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms