RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NXPH3O95157 252 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 MAS1LP35410 378 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 CAV2P51636 162 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 OR2B8PP59922 312 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 RPL8P62917 257 aaKnown RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 ARSJQ5FYB0 599 aaPredicted RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 MRPL41Q8IXM3 137 aaKnown RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 MMD2Q8IY49 270 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 Q8N6K4 173 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 DTD1Q8TEA8 209 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 OR4F4Q96R69 305 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 QTRT1Q9BXR0 403 aaKnown RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 COMMD5Q9GZQ3 224 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 HIPK2Q9H2X6 1198 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 RBKSQ9H477 322 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
CPSF3-203ENST00000475482 OR51B2Q9Y5P1 312 aa12.31□□□□□ -0.44
CPSF3-203ENST00000475482 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 G3V4G9 280 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 ACTL6BO94805 426 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 BAXQ07812 192 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 HES1Q14469 280 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 OPCMLQ14982 345 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 CENPVQ7Z7K6 275 aaPredicted RBP12.3□□□□□ -0.44
CPSF3-203ENST00000475482 STX12Q86Y82 276 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 C1QL4Q86Z23 238 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 ARPC5LQ9BPX5 153 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 SLA2Q9H6Q3 261 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 PSENENQ9NZ42 101 aa12.3□□□□□ -0.44
CPSF3-203ENST00000475482 BCL2L11O43521 198 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 SLC25A17O43808 307 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 TMEM11P17152 192 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 F2RL1P55085 397 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 EIF5AP63241 154 aaKnown RBP12.29□□□□□ -0.44
CPSF3-203ENST00000475482 PLGLAQ15195 96 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 PSG5Q15238 335 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 MMDQ15546 238 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 C10orf99Q6UWK7 81 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 OR1L8Q8NGR8 309 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 C11orf1Q9H5F2 150 aa12.29□□□□□ -0.44
CPSF3-203ENST00000475482 A0A1W2PN81 502 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 NBR2O15453 112 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 IGHG2P01859 326 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 CHRNA7P36544 502 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 ATP5IP56385 69 aaPredicted RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 SLC51BQ86UW2 128 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 NPBQ8NG41 125 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 PLEKHA3Q9HB20 300 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 HEYLQ9NQ87 328 aaPredicted RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 PLSCR3Q9NRY6 295 aa12.28□□□□□ -0.44
CPSF3-203ENST00000475482 METTL1Q9UBP6 276 aaKnown RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
CPSF3-203ENST00000475482 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 RRHO14718 337 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 IAPPP10997 89 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 HBG1P69891 147 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 HBG2P69892 147 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 PRCDQ00LT1 54 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 HNF4GQ14541 408 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 PPP1R27Q86WC6 154 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 TMEM252Q8N6L7 170 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 OR4X2Q8NGF9 303 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
CPSF3-203ENST00000475482 DNAH3Q8TD57 4116 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 BORCS7-ASMTA0A0B4J1R7 106 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 TEX50A0A1B0GTY4 177 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 TCRBV4S1A1TA0A5B7 111 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 FAM24AA6NFZ4 105 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 MSGN1A6NI15 193 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 NDUFA3O95167 84 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 CRYGBP07316 175 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 SULT1A1P50225 295 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 PAX9P55771 341 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 EWSR1Q01844 656 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPSF3-203ENST00000475482 PRSS8Q16651 343 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 C9orf152Q5JTZ5 239 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 Q8N9W7 124 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
CPSF3-203ENST00000475482 U3KQ87 197 aa12.26□□□□□ -0.45
CPSF3-203ENST00000475482 JTBO76095 146 aa12.25□□□□□ -0.45
CPSF3-203ENST00000475482 TMEM50AO95807 157 aa12.25□□□□□ -0.45
CPSF3-203ENST00000475482 RAB11AP62491 216 aa12.25□□□□□ -0.45
CPSF3-203ENST00000475482 ERHP84090 104 aaKnown RBP12.25□□□□□ -0.45
CPSF3-203ENST00000475482 HSD17B13Q7Z5P4 300 aaPredicted RBP12.25□□□□□ -0.45
CPSF3-203ENST00000475482 OR1S2Q8NGQ3 325 aa12.25□□□□□ -0.45
CPSF3-203ENST00000475482 RITA1Q96K30 269 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms