RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	MYO18A	Q92614	2054 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A087X0K7	114 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TRBV5-5	A0A0J9YX44	114 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZFP92	A6NM28	416 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CEBPZOS	A8MTT3	80 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SDCBP	O00560	298 aa	Predicted RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FCN1	O00602	326 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PTGES	O14684	152 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LDB3	O75112	727 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NDUFA7	O95182	113 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	EGR2	P11161	476 aa	Predicted RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MYOD1	P15172	320 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CNTFR	P26992	372 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CD38	P28907	300 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PTGDS	P41222	190 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PSMB3	P49720	205 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FXYD6P3	P58550	94 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPS15A	P62244	130 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPL31	P62899	125 aa	Known RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TAF10	Q12962	218 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	WFDC2	Q14508	124 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319		Q56UQ5	140 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NOXRED1	Q6NXP6	359 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	C2orf91	Q6ZV80	131 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	VN1R2	Q8NFZ6	395 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TSKU	Q8WUA8	353 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GTSF1	Q8WW33	167 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PPDPFL	Q8WWR9	84 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM230	Q96A57	120 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PRELID3A	Q96N28	172 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	WWC2-AS2	Q96NR7	200 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MCHR1	Q99705	422 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RASL11B	Q9BPW5	248 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MLST8	Q9BVC4	326 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	BCL2L10	Q9HD36	194 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KLK13	Q9UKR3	277 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FOXA2	Q9Y261	457 aa	Predicted RBP	4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KCNE3	Q9Y6H6	103 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ARL2-SNX15	V9GYD0	113 aa		4.92	□□□□□ -1.62
ECHDC1-215	ENST00000475319	IGLV3-22	A0A075B6J6	115 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A0B4J2E0	115 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MDFIC2	A0A1B0GVS7	189 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1B0GX12	115 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	C5orf49	A4QMS7	147 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RRH	O14718	337 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ENSA	O43768	121 aa	Known RBP	4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CRLF1	O75462	422 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ATP5L	O75964	103 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HLA-DQA1	P01909	254 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CPM	P14384	443 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ACRV1	P26436	265 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PRDX2	P32119	198 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CEACAM16	Q2WEN9	425 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	IBA57	Q5T440	356 aa	Known RBP	4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HAPLN4	Q86UW8	402 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SLC22A18AS	Q8N1D0	253 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR11H6	Q8NGC7	330 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR10G8	Q8NGN5	311 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SSC4D	Q8WTU2	575 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ARPC1A	Q92747	370 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RDH5	Q92781	318 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FAM3D	Q96BQ1	224 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	B9D1	Q9UPM9	204 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HELZ	P42694	1942 aa	Known RBP	4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MYO9B	Q13459	2157 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HTT	P42858	3142 aa		4.91	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TRBV5-7	A0A0A0MS05	114 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	LOC107984640	A0A0U1RRK4	108 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319		A0A1B0GWB2	263 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	C2orf70	A6NJV1	201 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	LINC00473	A8K010	186 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319		K7ESM1	405 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	MRPL3	P09001	348 aa	Known RBP	4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	IGLC6	P0CF74	106 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	KLRB1	Q12918	225 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	HSPB3	Q12988	150 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	CLEC12B	Q2HXU8	276 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	CXCL17	Q6UXB2	119 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	IL17REL	Q6ZVW7	336 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	ZNF627	Q7L945	461 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	TRAPPC6B	Q86SZ2	158 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	ZNF114	Q8NC26	417 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	OR9G1	Q8NH87	305 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	OR1F12	Q8NHA8	337 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	NEURL3	Q96EH8	262 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	ADAT3	Q96EY9	351 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	SLC25A44	Q96H78	314 aa	Predicted RBP	4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	C5orf66	Q9H5L9	145 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	SLC39A9	Q9NUM3	307 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	IL36B	Q9NZH7	164 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	ANAPC10	Q9UM13	185 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	PROCR	Q9UNN8	238 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	OR2W1	Q9Y3N9	320 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	OARD1	Q9Y530	152 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	OR1A2	Q9Y585	309 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319		R4GN57	208 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	ATG2A	Q2TAZ0	1938 aa		4.9	□□□□□ -1.63
ECHDC1-215	ENST00000475319	TRAV5	A0A0B4J249	113 aa		4.89	□□□□□ -1.63
ECHDC1-215	ENST00000475319	TMEM89	A2RUT3	159 aa		4.89	□□□□□ -1.63

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