RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 PPP5CP53041 499 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 PIGPP57054 158 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 SCGB2B2Q4G0G5 96 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 LAX1Q8IWV1 398 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 ARRDC1Q8N5I2 433 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 UBAC2Q8NBM4 344 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 OR4D10Q8NGI6 311 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 OR5B3Q8NH48 314 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 ZNF502Q8TBZ5 544 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 VN1R17PQ8TDU5 208 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 SEC22AQ96IW7 307 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 NEURL2Q9BR09 285 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 THAP7Q9BT49 309 aaPredicted RBP7.12□□□□□ -1.27
PDPN-204ENST00000475043 MIXL1Q9H2W2 232 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 PALMDQ9NP74 551 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 FAM212BQ9NTI7 297 aaPredicted RBP7.12□□□□□ -1.27
PDPN-204ENST00000475043 TMEM14BQ9NUH8 114 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 MTFP1Q9UDX5 166 aa7.12□□□□□ -1.27
PDPN-204ENST00000475043 F11RQ9Y624 299 aaKnown RBP7.12□□□□□ -1.27
PDPN-204ENST00000475043 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 ZNF785A8K8V0 405 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 A8MWP6 167 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 GABARAPH6UMI1 98 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 CTDSP2O14595 271 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 TGOLN2O43493 480 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 NOL3O60936 208 aaKnown RBP7.11□□□□□ -1.27
PDPN-204ENST00000475043 RAB3DO95716 219 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 IGKV1-39P01597 117 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 IGKV1D-39P04432 117 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 CD7P09564 240 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 TBPP20226 339 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 MFAP2P55001 183 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 TAS2R19P59542 299 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 Q56UQ5 140 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 ZNF57Q68EA5 555 aaPredicted RBP7.11□□□□□ -1.27
PDPN-204ENST00000475043 STEAP1BQ6NZ63 245 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 BTNL8Q6UX41 500 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 LHFPL1Q86WI0 220 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 CADM3Q8N126 398 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 TMEM229BQ8NBD8 167 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 UXS1Q8NBZ7 420 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 RAB2BQ8WUD1 216 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
PDPN-204ENST00000475043 ZNF486Q96H40 463 aaPredicted RBP7.11□□□□□ -1.27
PDPN-204ENST00000475043 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 C21orf62Q9NYP8 219 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 COPZ2Q9P299 210 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 UFC1Q9Y3C8 167 aa7.11□□□□□ -1.27
PDPN-204ENST00000475043 C3orf85A0A1B0GTC6 90 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
PDPN-204ENST00000475043 AKR1C2P52895 323 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 RND3P61587 244 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 MRPS10P82664 201 aaKnown RBP7.1□□□□□ -1.27
PDPN-204ENST00000475043 IL18Q14116 193 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 HAGHQ16775 308 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 IZUMO4Q1ZYL8 232 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 TRIM16LQ309B1 348 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 FAAP20Q6NZ36 180 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 RBPMS2Q6ZRY4 209 aaKnown RBP7.1□□□□□ -1.27
PDPN-204ENST00000475043 SLC16A13Q7RTY0 426 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 TMEM61Q8N0U2 210 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 DEFB125Q8N687 156 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 CCDC71LQ8N9Z2 235 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 OR52B4Q8NGK2 314 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 OR1L6Q8NGR2 347 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 ZFAND1Q8TCF1 268 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 MARCH1Q8TCQ1 289 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 SCARB1Q8WTV0 552 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 MISP3Q96FF7 219 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 BSCL2Q96G97 398 aaPredicted RBP7.1□□□□□ -1.27
PDPN-204ENST00000475043 DIRAS2Q96HU8 199 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 TP53RKQ96S44 253 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 C20orf24Q9BUV8 137 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 WFDC10AQ9H1F0 79 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 MLXQ9UH92 298 aa7.1□□□□□ -1.27
PDPN-204ENST00000475043 IGHV3OR16-8A0A075B7F1 116 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 C3orf84H3BNL1 204 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 ATG12O94817 140 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 CD74P04233 296 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 TMBIM6P55061 237 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 HSPE1P61604 102 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 ERHP84090 104 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 SP6Q3SY56 376 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 SPSB3Q6PJ21 355 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 OR13C8Q8NGS7 320 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 OR1P1Q8NH06 330 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 RNASE11Q8TAA1 199 aaKnown RBP7.09□□□□□ -1.27
PDPN-204ENST00000475043 DYNC2LI1Q8TCX1 351 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
PDPN-204ENST00000475043 PINX1Q96BK5 328 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms