RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 C1QL2Q7Z5L3 287 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 KLHL30-AS1Q8NEE0 82 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 NABP1Q96AH0 204 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 FOXC2Q99958 501 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 DPH3P1Q9H4G8 78 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 VPREB3Q9UKI3 123 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 RFNGQ9Y644 331 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TRAV25A0A0B4J276 109 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 NANOS3P60323 173 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SUPT4H1P63272 117 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 FOXF2Q12947 444 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 PRSS8Q16651 343 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 CLLU1Q5K131 121 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM42Q69YG0 159 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SHISA2Q6UWI4 295 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 PIP4P2Q8N4L2 257 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 OR8A1Q8NGG7 326 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 RGP1Q92546 391 aaPredicted RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 GPR146Q96CH1 333 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SLIRPQ9GZT3 109 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 NPDC1Q9NQX5 325 aaPredicted RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 ARL2-SNX15V9GYD0 113 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 F2Z2F3 143 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 M0R143 59 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 RAMP3O60896 148 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SIX6O95475 246 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 PPBPP02775 128 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SOD3P08294 240 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 GPR183P32249 361 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF585BQ52M93 769 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TOMM20LQ6UXN7 152 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 CLEC19AQ6UXS0 136 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 C1QL4Q86Z23 238 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 FAM89BQ8N5H3 189 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM252Q8N6L7 170 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 OR1N2Q8NGR9 330 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 NUDT11Q96G61 164 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TRGV9Q99603 122 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 NABP2Q9BQ15 211 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 GEMIN7Q9H840 131 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 MRPL27Q9P0M9 148 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 VENTXO95231 258 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 CA2P00918 260 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 SUMO1P63165 101 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF562Q6V9R5 426 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM91Q6ZNR0 172 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 PRNTQ86SH4 94 aa3.83□□□□□ -1.8
CCNL1-215ENST00000474539 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
CCNL1-215ENST00000474539 TRGV4A0A0C4DH28 118 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 A0A1W2PPE3 182 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 MSGN1A6NI15 193 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 GCM2O75603 506 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 PRSS1P07477 247 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 CTSBP07858 339 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 PPIFP30405 207 aaKnown RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 KRTDAPP60985 99 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SIGLEC15Q6ZMC9 328 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 Q8NFD4 153 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SGMS2Q8NHU3 365 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 RNF125Q96EQ8 232 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SEPSECSQ9HD40 501 aaKnown RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 MBNL3Q9NUK0 354 aaKnown RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 OR5AL1P0C617 328 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 CDX1P47902 265 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 RPL29P47914 159 aaKnown RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 NHLH2Q02577 135 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF56Q15929 161 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 IL17RELQ6ZVW7 336 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM256Q8N2U0 113 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 GVQW1Q8N7I0 195 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 NPIPB3Q92617 1050 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 AQP10Q96PS8 301 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 RSG1Q9BU20 258 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 GSX1Q9H4S2 264 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SIGLEC9Q9Y336 463 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SDK1Q7Z5N4 2213 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV3OR16-10A0A075B7F0 116 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 A0A1B0GWJ7 208 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 MPTX1A8MV57 137 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 FCN1O00602 326 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 ATP5LO75964 103 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SAA2P0DJI9 122 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 BCL2P10415 239 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 HTN1P15515 57 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 OTX1P32242 354 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 PTTG1IPP53801 180 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SNRPEP62304 92 aaKnown RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 PDE6HQ13956 83 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 KIAA0141Q14154 515 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM187Q14656 261 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 IGSF11Q5DX21 431 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM200BQ69YZ2 307 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 XAF1Q6GPH4 301 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 LYZL2Q7Z4W2 148 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms