RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 TSPAN32Q96QS1 320 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 TSNAXQ99598 290 aaKnown RBP2□□□□□ -2.09
TMEM50B-208ENST00000474272 VPS25Q9BRG1 176 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 C2orf88Q9BSF0 95 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 ACTR3CQ9C0K3 210 aaPredicted RBP2□□□□□ -2.09
TMEM50B-208ENST00000474272 ARV1Q9H2C2 271 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 EDA2RQ9HAV5 297 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 RHOFQ9HBH0 211 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 BEX1Q9HBH7 125 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 WFDC1Q9HC57 220 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 NIT2Q9NQR4 276 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 PARP11Q9NR21 331 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 SMCO4Q9NRQ5 59 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 SPANXA1Q9NS26 97 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 COA4Q9NYJ1 87 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 GSKIPQ9P0R6 139 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 MYEF2Q9P2K5 600 aaKnown RBP2□□□□□ -2.09
TMEM50B-208ENST00000474272 NAGKQ9UJ70 344 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 OR52A1Q9UKL2 312 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 RHBDD3Q9Y3P4 386 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 R4GMQ9 66 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 HIVEP2P31629 2446 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 DOCK9Q9BZ29 2069 aa2□□□□□ -2.09
TMEM50B-208ENST00000474272 SCN8AQ9UQD0 1980 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 PLXNB3Q9ULL4 1909 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 PLXNA2O75051 1894 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 PLXNA4Q9HCM2 1894 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 MYO16Q9Y6X6 1858 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 ANKRD12Q6UB98 2062 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TRAV8-7A0A075B6U6 113 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 FXYD6-FXYD2A0A087WZ82 144 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 IGLV3-32A0A0A0MS00 114 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TMED7-TICAM2A0A0A6YYA0 188 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SPTY2D1-AS1A0A0U1RR47 76 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TMEM269A0A1B0GVZ9 245 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 COLCA2A8K830 154 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 LINC00587B1AMM8 73 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 FTCDNL1E5RQL4 147 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 M0R036 132 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TOX3O15405 576 aaPredicted RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SLC31A1O15431 190 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TGOLN2O43493 480 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SLC16A7O60669 478 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SIX6O95475 246 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CST4P01036 141 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 IFNA21P01568 189 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 IFNA17P01571 189 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 IGLV3-1P01715 115 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 HLA-AP01891 365 aaKnown RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CLPSP04118 112 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 GIMD1P0DJR0 217 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR8G3PP0DMU2 310 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SCGB1A1P11684 91 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CTSEP14091 401 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 MUC1P15941 1255 aaPredicted RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CBR1P16152 277 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 PVALBP20472 110 aaPredicted RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CCL1P22362 96 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 S100A2P29034 98 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 S100GP29377 79 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 IL12BP29460 328 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 GNRHRP30968 328 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 ARR3P36575 388 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 UQCRFS1P47985 274 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 GABRA4P48169 554 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 DNASE1L1P49184 302 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 SULT1A2P50226 295 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 RAB9AP51151 201 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 UBE2NP61088 152 aaKnown RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 LSM6P62312 80 aaKnown RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 RPL19P84098 196 aaKnown RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 DEFA5Q01523 94 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 ZNF117Q03924 483 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TNFRSF9Q07011 255 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 RSU1Q15404 277 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 HIST3H3Q16695 136 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 BEX5Q5H9J7 111 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TCEAL5Q5H9L2 206 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 AVPI1Q5T686 147 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 FBXW9Q5XUX1 488 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 H3F3CQ6NXT2 135 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 HAGHLQ6PII5 290 aaPredicted RBP1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 ASCL4Q6XD76 172 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 Q6ZSR6 202 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 HIST2H3AQ71DI3 136 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 LGI3Q8N145 548 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 LRRC18Q8N456 261 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 C11orf72Q8NBR9 251 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CHST4Q8NCG5 386 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR8G5Q8NG78 346 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR5D18Q8NGL1 313 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR6N2Q8NGY6 317 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR8S1Q8NH09 359 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 OR4K15Q8NH41 348 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 ZNF563Q8TA94 476 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 GPR119Q8TDV5 335 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 RAB1CQ92928 201 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 CAMK2N2Q96S95 79 aa1.99□□□□□ -2.09
TMEM50B-208ENST00000474272 TIMM17AQ99595 171 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms