RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CHCHD7Q9BUK0 85 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 BCL2L14Q9BZR8 327 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 METTL9Q9H1A3 318 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 C8orf17Q9NRJ1 99 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 TAAR3PQ9P1P4 343 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 KLK12Q9UKR0 248 aa1.5□□□□□ -2.17
CALD1-216ENST00000473714 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.5□□□□□ -2.17
CALD1-216ENST00000473714 PUS1Q9Y606 427 aaKnown RBP eCLIP1.5□□□□□ -2.17
CALD1-216ENST00000473714 USH2AO75445 5202 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 IGKV2D-24A0A075B6R9 120 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 IGHV6-1A0A0B4J1U7 121 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 FABP12A6NFH5 140 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 OR6C70A6NIJ9 312 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 CD300LBA8K4G0 201 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 H3BSH0 61 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 ITGB1BP1O14713 200 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 BET1O15155 118 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TGOLN2O43493 480 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 MPZL2O60487 215 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SERPINA6P08185 405 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 S100A2P29034 98 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 MPIP34949 423 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 GLRXP35754 106 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 HSPA13P48723 471 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SULT1A2P50226 295 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 RAB13P51153 203 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 PSMD7P51665 324 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 DLX6P56179 175 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 BLCAPP62952 87 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TNFRSF9Q07011 255 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TMED2Q15363 201 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 LUZP6Q538Z0 58 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 RNASE13Q5GAN3 156 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 CLEC12AQ5QGZ9 265 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 CCDC122Q5T0U0 273 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 KHDRBS2Q5VWX1 349 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 PTRHD1Q6GMV3 140 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 LAMTOR1Q6IAA8 161 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 FAM173BQ6P4H8 233 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 FAM19A1Q7Z5A9 133 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SAXO1Q8IYX7 474 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 GAPTQ8N292 157 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SLC25A29Q8N8R3 303 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 LFNGQ8NES3 379 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 OR2Z1Q8NG97 314 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 DTD1Q8TEA8 209 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 C17orf50Q8WW18 174 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 RORBQ92753 470 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TNFRSF14Q92956 283 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 RBPMSQ93062 196 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 TMBIM1Q969X1 311 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 MS4A6EQ96DS6 147 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SMIM12Q96EX1 92 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 LINC00477Q96M19 166 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TMEM56Q96MV1 263 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 DERL3Q96Q80 235 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SPACA5Q96QH8 159 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TMEM208Q9BTX3 173 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 ZNF426Q9BUY5 554 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 C1orf50Q9BV19 199 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 SAMD10Q9BYL1 202 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 TSGA10Q9BZW7 698 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 FBXL15Q9H469 300 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 ZNF430Q9H8G1 570 aaPredicted RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 RAB26Q9ULW5 256 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 C14orf166Q9Y224 244 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 CBY1Q9Y3M2 126 aa1.49□□□□□ -2.17
CALD1-216ENST00000473714 POLR3HQ9Y535 204 aaPredicted RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 YTHDF2Q9Y5A9 579 aaKnown RBP1.49□□□□□ -2.17
CALD1-216ENST00000473714 IGLV2-18A0A075B6J9 118 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 TRAV8-3A0A0A6YYJ7 113 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 A0A1B0GX12 115 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 TMEM72A0PK05 275 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 PGPA6NDG6 321 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 A8MU10 97 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 GOLGA8KD6RF30 607 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 FTCDNL1E5RQL4 147 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 H3BQV1 296 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 CDIPTO14735 213 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 PHYHO14832 338 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 NPFFO15130 113 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 SSNA1O43805 119 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 SOX14O95416 240 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 NRASP01111 189 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 HRASP01112 189 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 KRASP01116 189 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 IGKV1D-16P01601 117 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 IGHV1-46P01743 117 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 ORM1P02763 201 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 MRPL3P09001 348 aaKnown RBP1.48□□□□□ -2.17
CALD1-216ENST00000473714 SEC11BP0C7V7 166 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 DNAH10OSP0CZ25 163 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 HIST1H1TP22492 207 aaPredicted RBP1.48□□□□□ -2.17
CALD1-216ENST00000473714 MSNP26038 577 aaKnown RBP1.48□□□□□ -2.17
CALD1-216ENST00000473714 EVI2BP34910 448 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 RPL22P35268 128 aaKnown RBP1.48□□□□□ -2.17
CALD1-216ENST00000473714 LGALS7P47929 136 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 ARF6P62330 175 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 HAMPP81172 84 aa1.48□□□□□ -2.17
CALD1-216ENST00000473714 REEP5Q00765 189 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms