RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 UQCR10Q9UDW1 63 aa11.69□□□□□ -0.54
NHLRC3-204ENST00000473371 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 CTRLP40313 264 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 BPIFB3P59826 476 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 DMRTA1Q5VZB9 504 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 MOB3BQ86TA1 216 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 C11orf42Q8N5U0 333 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 CLCF1Q9UBD9 225 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 BMPR1BO00238 502 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 ISLRO14498 428 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 CHRNB4P30926 498 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 ATP1A1-AS1Q5TC04 95 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 TMEM178AQ8NBL3 297 aa11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 HEATR1Q9H583 2144 aaKnown RBP11.68□□□□□ -0.54
NHLRC3-204ENST00000473371 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 NTF3P20783 257 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 MRPS11P82912 194 aaKnown RBP11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 CR1LQ2VPA4 569 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 Q6ZN92 141 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 FAM19A2Q8N3H0 131 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 SLC35E1Q96K37 410 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 CDC42EP3Q9UKI2 254 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 J3QR06 171 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 SIAH2O43255 324 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 C3orf79P0CE67 100 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 TAS2R45P59539 299 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 VWA1Q6PCB0 445 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 LYG1Q8N1E2 194 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 ZFP30Q9Y2G7 519 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 PPIAL4AQ9Y536 164 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 APCSP02743 223 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 WNT10AQ9GZT5 417 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNF331Q9NQX6 463 aaPredicted RBP11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 TUBG2Q9NRH3 451 aa11.67□□□□□ -0.54
NHLRC3-204ENST00000473371 DPRXA6NFQ7 191 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 PRRX1P54821 245 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 MBNL2Q5VZF2 373 aaKnown RBP11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 GCSAMQ8N6F7 178 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 IGHV2OR16-5A0A0B4J2B6 119 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 IGLV2-8P01709 118 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 NIT1Q86X76 327 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 NHLRC2Q8NBF2 726 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
NHLRC3-204ENST00000473371 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 TCF21O43680 179 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 HYPMO75409 117 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 MMP23AO75900 390 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 CA1P00915 261 aaPredicted RBP11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 PPOXP50336 477 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 IGKV1OR2-108A0A075B7D4 117 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 IZUMO1RA6ND01 250 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 TRIOBPQ9H2D6 2365 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 TRAV34A0A0B4J273 112 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 IGHV1-18A0A0C4DH31 117 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 KIR2DL2P43627 348 aaPredicted RBP11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 C17orf58Q2M2W7 97 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 C19orf35Q6ZS72 473 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 MOGAT3Q86VF5 341 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 STPG4Q8N801 248 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 ZNF439Q8NDP4 499 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.54
NHLRC3-204ENST00000473371 A0A1W2PRE2 83 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 C8orf88P0DMB2 117 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 RTL8BQ17RB0 113 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 ATOH7Q8N100 152 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 KLHDC1Q8N7A1 406 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 C1orf162Q8NEQ5 155 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 ADTRPQ96IZ2 230 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 REG1AP05451 166 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 GNG10P50151 68 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 MLANAQ16655 118 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 C1orf210Q8IVY1 113 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 SPRNQ5BIV9 151 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 OR2V2Q96R30 315 aa11.64□□□□□ -0.55
NHLRC3-204ENST00000473371 C19orf24Q9BVV8 132 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms