RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TRAV10A0A0B4J240 114 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 METTL21EPA6NDL7 271 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 DBX1A6NMT0 343 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
VCL-204ENST00000472585 PSMA1P25786 263 aaKnown RBP6.74□□□□□ -1.33
VCL-204ENST00000472585 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 FCGR2CP31995 323 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 TRAM1Q15629 374 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 LGALS9BQ3B8N2 356 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 ZNF818PQ6ZRF7 136 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 SECTM1Q8WVN6 248 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 OR10C1Q96KK4 312 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 SRSF8Q9BRL6 282 aaKnown RBP6.74□□□□□ -1.33
VCL-204ENST00000472585 CENPOQ9BU64 300 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
VCL-204ENST00000472585 HRH4Q9H3N8 390 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 ACOT13Q9NPJ3 140 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 NDUFA4L2Q9NRX3 87 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 NSG2Q9Y328 171 aa6.74□□□□□ -1.33
VCL-204ENST00000472585 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 RBFOX2O43251 390 aaKnown RBP eCLIP6.73□□□□□ -1.33
VCL-204ENST00000472585 RGS10O43665 173 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 HPRT1P00492 218 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 IGHV3-48P01763 117 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 FCER2P06734 321 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 TRAPPC2P0DI81 140 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 TRAPPC2BP0DI82 140 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 RAB3BP20337 219 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 TAS2R31P59538 309 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 LEMD1Q68G75 181 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 SPSB3Q6PJ21 355 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 Q6ZTC4 211 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 Q8N1X5 172 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 UBAC2Q8NBM4 344 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 TMEM116Q8NCL8 245 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 NRG4Q8WWG1 115 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 RNF126Q9BV68 326 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 COMMD5Q9GZQ3 224 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 SCN3BQ9NY72 215 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 F11RQ9Y624 299 aaKnown RBP6.73□□□□□ -1.33
VCL-204ENST00000472585 X6R8D5 127 aa6.73□□□□□ -1.33
VCL-204ENST00000472585 TRDV1A0A1B0GX56 115 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 I3L2K1 104 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 PDCD5O14737 125 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 PPYP01298 95 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 IFNA10P01566 189 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 IFNA21P01568 189 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 IFNA17P01571 189 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 NQO2P16083 231 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
VCL-204ENST00000472585 DEFB131AP59861 70 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 TMEM187Q14656 261 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 PRSS48Q7RTY5 328 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 OR13F1Q8NGS4 319 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 ST8SIA2Q92186 375 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 THYN1Q9P016 225 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 CELA1Q9UNI1 258 aa6.72□□□□□ -1.33
VCL-204ENST00000472585 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.33
VCL-204ENST00000472585 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 TRAV14DV4A0A0A6YYC5 116 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 IGHV3-66A0A0C4DH42 116 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 NUPL2O15504 423 aaKnown RBP6.71□□□□□ -1.34
VCL-204ENST00000472585 DFFBO76075 338 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 C4BPBP20851 252 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 GNRHRP30968 328 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 MSMO1Q15800 293 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 C12orf74Q32Q52 190 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 Q56UQ5 140 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 C22orf42Q6IC83 251 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 TCF24Q7RTU0 167 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 CSNK1G2-AS1Q8NCQ2 148 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 BEST4Q8NFU0 473 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 OR5H6Q8NGV6 325 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 OR51H1Q8NH63 302 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 GIMAP1Q8WWP7 306 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 DGCR14Q96DF8 476 aaKnown RBP6.71□□□□□ -1.34
VCL-204ENST00000472585 ATP6V0BQ99437 205 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 NDUFAF3Q9BU61 184 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 HINT2Q9BX68 163 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 CCDC90BQ9GZT6 254 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 SLC5A7Q9GZV3 580 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 MS4A6AQ9H2W1 248 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 VSIRQ9H7M9 311 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 PLEKHA2Q9HB19 425 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 TPRKBQ9Y3C4 175 aa6.71□□□□□ -1.34
VCL-204ENST00000472585 AGRNO00468 2067 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 ZNF705EA8MWA4 302 aaPredicted RBP6.7□□□□□ -1.34
VCL-204ENST00000472585 MRPS14O60783 128 aaKnown RBP6.7□□□□□ -1.34
VCL-204ENST00000472585 FGF2P09038 288 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 LPAR6P43657 344 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 AQP4P55087 323 aa6.7□□□□□ -1.34
VCL-204ENST00000472585 FXYD4P59646 89 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms