RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 CX3CL1P78423 397 aa14.42□□□□□ -0.1
LAMP1-203ENST00000472564 ZNF324BQ6AW86 544 aaPredicted RBP14.42□□□□□ -0.1
LAMP1-203ENST00000472564 TMEM144Q7Z5S9 345 aa14.42□□□□□ -0.1
LAMP1-203ENST00000472564 NABP1Q96AH0 204 aa14.42□□□□□ -0.1
LAMP1-203ENST00000472564 RBFOX2O43251 390 aaKnown RBP eCLIP14.42□□□□□ -0.1
LAMP1-203ENST00000472564 TFPI2P48307 235 aa14.42□□□□□ -0.1
LAMP1-203ENST00000472564 HEPN1Q6WQI6 88 aa14.42□□□□□ -0.1
LAMP1-203ENST00000472564 GBF1Q92538 1859 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 ZNF600Q6ZNG1 722 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 UBE2CO00762 179 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 TMEM170AQ8WVE7 144 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 C14orf144Q96I85 54 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 FAM90A1Q86YD7 464 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 FBXL15Q9H469 300 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 SBF1O95248 1867 aa14.41□□□□□ -0.1
LAMP1-203ENST00000472564 TRAV9-1A0A075B6T8 112 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 OR52E5Q8NH55 327 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 MBD3L1Q8WWY6 194 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 LOC105371242A0A075B767 164 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 TMEM238LA0A1B0GVL6 79 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 A6NJY4 79 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 B9A039 149 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 NUDT3O95989 172 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 SAPCD1Q5SSQ6 148 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 C17orf82Q86X59 251 aaPredicted RBP14.4□□□□□ -0.1
LAMP1-203ENST00000472564 PHLDA3Q9Y5J5 127 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 YPEL1O60688 119 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 RNF144BQ7Z419 303 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 YPEL2Q96QA6 119 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 MRPL20Q9BYC9 149 aaKnown RBP14.4□□□□□ -0.1
LAMP1-203ENST00000472564 KIAA2026Q5HYC2 2103 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 IGKV1-27A0A075B6S5 117 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 CLPSP04118 112 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 C9orf106Q8NAJ2 232 aa14.4□□□□□ -0.1
LAMP1-203ENST00000472564 FOXG1P55316 489 aaPredicted RBP14.39□□□□□ -0.11
LAMP1-203ENST00000472564 PLP1P60201 277 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 RAB9AP51151 201 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 WDR82Q6UXN9 313 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 FAM19A2Q8N3H0 131 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 C5orf63A6NC05 138 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 TAS2R60P59551 318 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 TMEM136Q6ZRR5 245 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 FAM131CQ96AQ9 280 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 LOC107984156A0A0G2JMH3 177 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 SERF1AO75920 110 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 ARL17AQ8IVW1 177 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 VSIRQ9H7M9 311 aa14.39□□□□□ -0.11
LAMP1-203ENST00000472564 SS18L1O75177 396 aaPredicted RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 ZFP36L1Q07352 338 aaKnown RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 EBLN2Q6P2I7 272 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 TCF23Q7RTU1 214 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 ELOVL5Q9NYP7 299 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 MORN2Q502X0 79 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 WDR83OSQ9Y284 106 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 F11RQ9Y624 299 aaKnown RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 PINLYPA6NC86 204 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 MEF2CQ06413 473 aaPredicted RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 DYNLRB2Q8TF09 96 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 SIP14410 1827 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 TFF1P04155 84 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 LEMD1Q68G75 181 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 HIST1H4GQ99525 98 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 LINC00312Q9Y6C7 94 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 SAA2-SAA4A0A096LPE2 208 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 A0A1B0GUT8 65 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 PGPEP1LA6NFU8 196 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 C9orf172C9J069 976 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 CLEC2AQ6UVW9 174 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 RTN4RL2Q86UN3 420 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 RNASEH2CQ8TDP1 164 aaKnown RBP14.38□□□□□ -0.11
LAMP1-203ENST00000472564 KLK15Q9H2R5 256 aa14.38□□□□□ -0.11
LAMP1-203ENST00000472564 IGHV3OR16-13A0A075B7E8 117 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 IGHV3-74A0A0B4J1X5 117 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 DNLZQ5SXM8 178 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 RNASE7Q9H1E1 156 aaKnown RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 PHF3Q92576 2039 aaKnown RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 SAA1P0DJI8 122 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 NPPCP23582 126 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 APOBEC3AP31941 199 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 QRFPP83859 136 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 PNRC2Q9NPJ4 139 aaKnown RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 DPM3Q9P2X0 92 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 C7orf71A4D174 169 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 PRR19A6NJB7 356 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 FOXI3A8MTJ6 420 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-203ENST00000472564 FHL1Q13642 323 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 RLFQ13129 1914 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 C15orf61A6NNL5 157 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 UPK2O00526 184 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 GCSAMLQ5JQS6 135 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 NDUFAF3Q9BU61 184 aa14.37□□□□□ -0.11
LAMP1-203ENST00000472564 SCN5AQ14524 2016 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 IGKV3D-15A0A087WSY6 115 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 GGNQ86UU5 652 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 PRDM13Q9H4Q3 707 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 S4R3C0 116 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 TRBV24-1A0A075B6N3 115 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 CCL3L1P16619 93 aa14.36□□□□□ -0.11
LAMP1-203ENST00000472564 DUTP33316 252 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms