RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 INSL3P51460 131 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 CCR6P51684 374 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 SUPT4H1P63272 117 aaKnown RBP10.96□□□□□ -0.65
BRCA1-211ENST00000472490 WT1-ASQ06250 92 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 ZNF846Q147U1 533 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 C9orf66Q5T8R8 295 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 SLC35G3Q8N808 338 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 ENY2Q9NPA8 101 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 SHPKQ9UHJ6 478 aa10.96□□□□□ -0.65
BRCA1-211ENST00000472490 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.65
BRCA1-211ENST00000472490 TRRAPQ9Y4A5 3859 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.95□□□□□ -0.66
BRCA1-211ENST00000472490 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 SEC14L6B5MCN3 397 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 LYRM1O43325 122 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 HOXD3P31249 432 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-211ENST00000472490 IZUMO4Q1ZYL8 232 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 BEAN1Q3B7T3 259 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-211ENST00000472490 SLC25A24Q6NUK1 477 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 OR1P1Q8NH06 330 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 OR52E5Q8NH55 327 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 LHFPL5Q8TAF8 219 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 DCUN1D4Q92564 292 aa10.95□□□□□ -0.66
BRCA1-211ENST00000472490 INS-IGF2F8WCM5 200 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 SFT2D2O95562 160 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 SNCAP37840 140 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 SUB1P53999 127 aaKnown RBP eCLIP10.94□□□□□ -0.66
BRCA1-211ENST00000472490 SLURP1P55000 103 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 SPCS3P61009 180 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 DEFA5Q01523 94 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 DEFA6Q01524 100 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 REC114Q7Z4M0 266 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 OR2C3Q8N628 320 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 VN1R17PQ8TDU5 208 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 DLX4Q92988 240 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-211ENST00000472490 ELOVL1Q9BW60 279 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 CACNG5Q9UF02 275 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 FBN3Q75N90 2809 aa10.94□□□□□ -0.66
BRCA1-211ENST00000472490 A0A0G2JRQ6 117 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
BRCA1-211ENST00000472490 NDUFB8O95169 186 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 SULT1A3P0DMM9 295 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 SULT1A4P0DMN0 295 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 HOXA1P49639 335 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-211ENST00000472490 PPP1R1AQ13522 171 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 AARDQ4LEZ3 155 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 MZT2BQ6NZ67 158 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 C19orf35Q6ZS72 473 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 LRTM2Q8N967 370 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 GPR146Q96CH1 333 aa10.93□□□□□ -0.66
BRCA1-211ENST00000472490 A0A1B0GU03 582 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 CORTO00230 105 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 PLA2G10O15496 165 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 WIPF1O43516 503 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 HLA-AP01891 365 aaKnown RBP10.92□□□□□ -0.66
BRCA1-211ENST00000472490 BTCP35070 178 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 KLF5Q13887 457 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-211ENST00000472490 SMCO1Q147U7 214 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 PDLIM3Q53GG5 364 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-211ENST00000472490 Q6ZRM9 215 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 COQ8AQ8NI60 647 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 OR4C12Q96R67 309 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 ATP6V0BQ99437 205 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 GAR1Q9NY12 217 aaKnown RBP10.92□□□□□ -0.66
BRCA1-211ENST00000472490 PEMTQ9UBM1 199 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 TMED3Q9Y3Q3 217 aa10.92□□□□□ -0.66
BRCA1-211ENST00000472490 UPK1BO75841 260 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 TRBV12-3P01733 135 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 SLC25A6P12236 298 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 NMSQ5H8A3 153 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 ACSM6Q6P461 480 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 C20orf85Q9H1P6 137 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 HIPK2Q9H2X6 1198 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 PRR13Q9NZ81 148 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
BRCA1-211ENST00000472490 PLXNB1O43157 2135 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 C9orf170A2RU37 121 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 CEBPZOSA8MTT3 80 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 BMPR1BO00238 502 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 SAP30O75446 220 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 TCRBP04435 133 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 CLEC3BP05452 202 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 OR4E1P0C645 316 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 ARL3P36405 182 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 HTR2BP41595 481 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 SYNJ2BPP57105 145 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 EGFEM1PQ0D2K5 195 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 ANKRD55Q3KP44 614 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 FAM106AQ4KMX7 169 aa10.9□□□□□ -0.66
BRCA1-211ENST00000472490 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms