RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 OR2C3Q8N628 320 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 UBAC2Q8NBM4 344 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 ATP6V0BQ99437 205 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 TSC22D3Q99576 134 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 CHRDL1Q9BU40 450 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 DAZ1Q9NQZ3 744 aaKnown RBP16.83■□□□□ 0.28
C9orf3-213ENST00000471978 TMEM14BQ9NUH8 114 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 DBX1A6NMT0 343 aa16.82■□□□□ 0.28
C9orf3-213ENST00000471978 NDUFA4O00483 81 aa16.82■□□□□ 0.28
C9orf3-213ENST00000471978 FAM212BQ9NTI7 297 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-213ENST00000471978 C15orf61A6NNL5 157 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 F8W735 103 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-213ENST00000471978 K7EIM0 57 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 ELK1P19419 428 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 RCVRNP35243 200 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 Q56UQ5 140 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 SPAG8Q99932 426 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-213ENST00000471978 C20orf24Q9BUV8 137 aa16.81■□□□□ 0.28
C9orf3-213ENST00000471978 TSPAN4O14817 238 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 HPGDSO60760 199 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 ADMP35318 185 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 PLECQ15149 4684 aaKnown RBP16.8■□□□□ 0.28
C9orf3-213ENST00000471978 LAMTOR1Q6IAA8 161 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 OR1P1Q8NH06 330 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 OR4A16Q8NH70 328 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 SEC22AQ96IW7 307 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 OVOL2Q9BRP0 275 aa16.8■□□□□ 0.28
C9orf3-213ENST00000471978 IGHV3OR16-8A0A075B7F1 116 aa16.79■□□□□ 0.28
C9orf3-213ENST00000471978 JTBO76095 146 aa16.79■□□□□ 0.28
C9orf3-213ENST00000471978 UCP3P55916 312 aa16.79■□□□□ 0.28
C9orf3-213ENST00000471978 H2BFWTQ7Z2G1 175 aa16.79■□□□□ 0.28
C9orf3-213ENST00000471978 UBQLN2Q9UHD9 624 aa16.79■□□□□ 0.28
C9orf3-213ENST00000471978 K7EMT4 169 aa16.78■□□□□ 0.28
C9orf3-213ENST00000471978 ZNF207O43670 478 aaKnown RBP16.78■□□□□ 0.28
C9orf3-213ENST00000471978 IGKV1-39P01597 117 aa16.78■□□□□ 0.28
C9orf3-213ENST00000471978 IGKV1D-39P04432 117 aa16.78■□□□□ 0.28
C9orf3-213ENST00000471978 RORCP51449 518 aa16.78■□□□□ 0.28
C9orf3-213ENST00000471978 M0QYG6 137 aa16.77■□□□□ 0.28
C9orf3-213ENST00000471978 CTSGP08311 255 aa16.77■□□□□ 0.28
C9orf3-213ENST00000471978 MRGPRFQ96AM1 343 aa16.77■□□□□ 0.28
C9orf3-213ENST00000471978 MISP3Q96FF7 219 aa16.77■□□□□ 0.28
C9orf3-213ENST00000471978 EPPK1P58107 5090 aaKnown RBP16.76■□□□□ 0.27
C9orf3-213ENST00000471978 C15orf62A8K5M9 175 aa16.76■□□□□ 0.27
C9orf3-213ENST00000471978 FAM25AB3EWG3 89 aa16.76■□□□□ 0.27
C9orf3-213ENST00000471978 FAM25CB3EWG5 89 aa16.76■□□□□ 0.27
C9orf3-213ENST00000471978 FAM25GB3EWG6 89 aa16.76■□□□□ 0.27
C9orf3-213ENST00000471978 RNASE12Q5GAN4 147 aaKnown RBP16.76■□□□□ 0.27
C9orf3-213ENST00000471978 HYDINQ4G0P3 5121 aa16.75■□□□□ 0.27
C9orf3-213ENST00000471978 I3L2K1 104 aa16.75■□□□□ 0.27
C9orf3-213ENST00000471978 NUPL2O15504 423 aaKnown RBP16.75■□□□□ 0.27
C9orf3-213ENST00000471978 APOC4P55056 127 aa16.75■□□□□ 0.27
C9orf3-213ENST00000471978 PRCDQ00LT1 54 aa16.75■□□□□ 0.27
C9orf3-213ENST00000471978 RELQ04864 619 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-213ENST00000471978 MZT2AQ6P582 158 aa16.75■□□□□ 0.27
C9orf3-213ENST00000471978 OR4C46A6NHA9 309 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 CTSDP07339 412 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-213ENST00000471978 MFAP4P55083 255 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 HSPE1P61604 102 aaKnown RBP16.74■□□□□ 0.27
C9orf3-213ENST00000471978 ODF3L2Q3SX64 289 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 ZNF114Q8NC26 417 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 TXN2Q99757 166 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 KLK11Q9UBX7 282 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 SMPXQ9UHP9 88 aa16.74■□□□□ 0.27
C9orf3-213ENST00000471978 YIF1AO95070 293 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 MT-CO2P00403 227 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 IGHV3-48P01763 117 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 PGAM2P15259 253 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 FCGR2BP31994 310 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-213ENST00000471978 ERHP84090 104 aaKnown RBP16.73■□□□□ 0.27
C9orf3-213ENST00000471978 RNASE10Q5GAN6 216 aaKnown RBP16.73■□□□□ 0.27
C9orf3-213ENST00000471978 Q6ZWC4 215 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 AP3S1Q92572 193 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 ZNF486Q96H40 463 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-213ENST00000471978 ZNF414Q96IQ9 312 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 ALMS1Q8TCU4 4167 aa16.73■□□□□ 0.27
C9orf3-213ENST00000471978 IGHV7-4-1A0A0J9YVY3 117 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 SPRY2O43597 315 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 PI3P19957 117 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 RND3P61587 244 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 IZUMO4Q1ZYL8 232 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 TMEM116Q8NCL8 245 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 OR52I2Q8NH67 350 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 PINX1Q96BK5 328 aaKnown RBP16.72■□□□□ 0.27
C9orf3-213ENST00000471978 RNF2Q99496 336 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 NAA50Q9GZZ1 169 aaKnown RBP16.72■□□□□ 0.27
C9orf3-213ENST00000471978 TP53TG1Q9Y2A0 90 aa16.72■□□□□ 0.27
C9orf3-213ENST00000471978 UBE2CO00762 179 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 CHEK1O14757 476 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 CD3DP04234 171 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 PIGPP57054 158 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 CTF1Q16619 201 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 DEFB135Q30KP9 77 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 SPINK9Q5DT21 86 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 LHFPL1Q86WI0 220 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 WFDC3Q8IUB2 231 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 ARRDC1Q8N5I2 433 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 OR10C1Q96KK4 312 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 RHPN1-AS1Q9BWJ2 59 aa16.71■□□□□ 0.27
C9orf3-213ENST00000471978 NXF2Q9GZY0 626 aaKnown RBP16.71■□□□□ 0.27
C9orf3-213ENST00000471978 EXTL2Q9UBQ6 330 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms