RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 LINC00482Q8N8I6 264 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 OR52E5Q8NH55 327 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 RCC1LQ96I51 464 aaKnown RBP11.7□□□□□ -0.54
SNX13-205ENST00000471744 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 MCRIP2Q9BUT9 160 aaKnown RBP11.7□□□□□ -0.54
SNX13-205ENST00000471744 GPR61Q9BZJ8 451 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 ALX4Q9H161 411 aaPredicted RBP11.7□□□□□ -0.54
SNX13-205ENST00000471744 C20orf85Q9H1P6 137 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 RANGRFQ9HD47 186 aaPredicted RBP11.7□□□□□ -0.54
SNX13-205ENST00000471744 ENY2Q9NPA8 101 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 CACNG5Q9UF02 275 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 PKD1L1Q8TDX9 2849 aa11.7□□□□□ -0.54
SNX13-205ENST00000471744 IGLV11-55A0A075B6I3 123 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 INS-IGF2F8WCM5 200 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 LINC01619G3V211 115 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 OR2J3O76001 311 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 HLA-AP01891 365 aaKnown RBP11.69□□□□□ -0.54
SNX13-205ENST00000471744 PRH1P02810 166 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 REG1AP05451 166 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 OR4E1P0C645 316 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 ZP3P21754 424 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 SPCS3P61009 180 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 C15orf32Q32M92 178 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 LYG2Q86SG7 212 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 GPR146Q96CH1 333 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 CXorf58Q96LI9 332 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 TBC1D24Q9ULP9 559 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 FLVCR2Q9UPI3 526 aa11.69□□□□□ -0.54
SNX13-205ENST00000471744 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
SNX13-205ENST00000471744 A0A1B0GU03 582 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 C9orf170A2RU37 121 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 SLC25A6P12236 298 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 DEFA1P59665 94 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 DEFA3P59666 94 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 DHRS2Q13268 280 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 EXOSC2Q13868 293 aaKnown RBP11.68□□□□□ -0.54
SNX13-205ENST00000471744 SMCO1Q147U7 214 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 ANKRD55Q3KP44 614 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 C4orf46Q504U0 113 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 PDLIM3Q53GG5 364 aaPredicted RBP11.68□□□□□ -0.54
SNX13-205ENST00000471744 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 Q6ZRM9 215 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 LYZL2Q7Z4W2 148 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 OR1P1Q8NH06 330 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 COQ8AQ8NI60 647 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 DUX3Q96PT4 197 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 PRR13Q9NZ81 148 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
SNX13-205ENST00000471744 TMED3Q9Y3Q3 217 aa11.68□□□□□ -0.54
SNX13-205ENST00000471744 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
SNX13-205ENST00000471744 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
SNX13-205ENST00000471744 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
SNX13-205ENST00000471744 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
SNX13-205ENST00000471744 EEF1AKMT3Q96AZ1 226 aa11.67□□□□□ -0.54
SNX13-205ENST00000471744 NUDT15Q9NV35 164 aa11.67□□□□□ -0.54
SNX13-205ENST00000471744 IGHV4OR15-8A0A075B7B6 117 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 A0A087WW49 117 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
SNX13-205ENST00000471744 TRBV7-1A0A0A6YYK4 115 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 NDUFB8O95169 186 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 SNCAP37840 140 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 SUB1P53999 127 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNX13-205ENST00000471744 DEFA5Q01523 94 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 VN1R17PQ8TDU5 208 aa11.66□□□□□ -0.54
SNX13-205ENST00000471744 NOTCH1P46531 2555 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 TRAV6A0A075B6T7 132 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 IFNA21P01568 189 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 IFITM3Q01628 133 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
SNX13-205ENST00000471744 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 CORTO00230 105 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 HOXD3P31249 432 aaPredicted RBP11.64□□□□□ -0.55
SNX13-205ENST00000471744 TATDN3Q17R31 274 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 RPEL1Q2QD12 228 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 SPINK9Q5DT21 86 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 MITD1Q8WV92 249 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 HIPK2Q9H2X6 1198 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
SNX13-205ENST00000471744 OVOL1O14753 267 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 HOXB5P09067 269 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 HTR2BP41595 481 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 SLURP1P55000 103 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 DUSP18Q8NEJ0 188 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 DCUN1D4Q92564 292 aa11.63□□□□□ -0.55
SNX13-205ENST00000471744 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms