RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PHYHO14832 338 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 FABP7O15540 132 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 STK16O75716 305 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CIAO1O76071 339 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 NPPAP01160 153 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 BPGMP07738 259 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 RPSAP08865 295 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 UCHL1P09936 223 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ORM2P19652 201 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CDK2P24941 298 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ATP6V0CP27449 155 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CALRP27797 417 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OPRM1P35372 400 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 UGT2B10P36537 528 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CCR2P41597 374 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ACTR1BP42025 376 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 SULT1A2P50226 295 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 AQP5P55064 265 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CTBP2P56545 445 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 DYNLL1P63167 89 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 MT1HP80294 61 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 EMX1Q04741 257 aaPredicted RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CD164Q04900 197 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 LGALS9BQ3B8N2 356 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TRMT12Q53H54 448 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CAVIN4Q5BKX8 364 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 AMTNQ6UX39 209 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 PID1Q7Z2X4 250 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 RPS19BP1Q86WX3 136 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 Q8N2B8 174 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM75Q8N9X5 138 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OR13C9Q8NGT0 318 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OR11H2Q8NH07 326 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OR5K1Q8NHB7 308 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 LGALS14Q8TCE9 139 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OR5P2Q8WZ92 322 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 SLC7A6Q92536 515 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ISOC1Q96CN7 298 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 MSANTD3Q96H12 275 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ABHD14BQ96IU4 210 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CATSPER2Q96P56 530 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ACBD6Q9BR61 282 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 DOHHQ9BU89 302 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 GAL3ST2Q9H3Q3 398 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 CST9LQ9H4G1 147 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 NRBP2Q9NSY0 501 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 DMAC2Q9NW81 257 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM216Q9P0N5 145 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 LINC00527Q9UJ94 153 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 DNAJC12Q9UKB3 198 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 HHLA2Q9UM44 414 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 XRN1Q8IZH2 1706 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TTC41PQ6P2S7 1318 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TONSLQ96HA7 1378 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 MGAMO43451 1857 aa0.03□□□□□ -2.41
UBXN4-207ENST00000471246 NAV1Q8NEY1 1877 aa0.03□□□□□ -2.41
UBXN4-207ENST00000471246 TROQ12816 1431 aaPredicted RBP0.03□□□□□ -2.41
UBXN4-207ENST00000471246 ADGRL3Q9HAR2 1447 aa0.03□□□□□ -2.41
UBXN4-207ENST00000471246 CFAP74Q9C0B2 1584 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CTTNBP2Q8WZ74 1663 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 DDX60LQ5H9U9 1706 aaKnown RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TIAM2Q8IVF5 1701 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 LAMB1P07942 1786 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 DLEC1Q9Y238 1755 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CHD2O14647 1828 aaKnown RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 NUP98P52948 1817 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 LAMA4Q16363 1823 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 K7EIL1 84 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 hCG_2039718K7EN88 272 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 BHLHE40O14503 412 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 UBE2L6O14933 153 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TGOLN2O43493 480 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CYTH3O43739 400 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SCN2BO60939 215 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CD7P09564 240 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MT1HL1P0DM35 61 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 OR13C7P0DN81 318 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CRYGAP11844 174 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 GADD45AP24522 165 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 LINC00313P59037 77 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TAS2R45P59539 299 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TAS2R30P59541 319 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 TSPAN5P62079 268 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 XRCC4Q13426 336 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 STK38Q15208 465 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MOGQ16653 247 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 C6orf183Q5T699 404 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 C7orf65Q6ZTY9 151 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SLC36A1Q7Z2H8 476 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MTERF4Q7Z6M4 381 aaKnown RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 OR51T1Q8NGJ9 327 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 OR52K2Q8NGK3 314 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CLDND2Q8NHS1 167 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 SMCR5Q8TEV8 140 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 CCDC127Q96BQ5 260 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MRAP2Q96G30 205 aa0.02□□□□□ -2.41
UBXN4-207ENST00000471246 RMND5BQ96G75 393 aaPredicted RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 MYCBPQ99417 103 aaPredicted RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 NKX6-2Q9C056 277 aaPredicted RBP0.02□□□□□ -2.41
UBXN4-207ENST00000471246 METTL8Q9H825 291 aaKnown RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms