RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MIR17HGQ75NE6 70 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 SMIM8Q96KF7 97 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 NPIPB13A6NJU9 1138 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 NPIPB5A8MRT5 1133 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 MYOD1P15172 320 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 ADMP35318 185 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 ATP5G3P48201 142 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 C9orf40Q8IXQ3 194 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 RCHY1Q96PM5 261 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 NRTNQ99748 197 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 OVOL2Q9BRP0 275 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 MYH9P35579 1960 aaKnown RBP5.83□□□□□ -1.48
BRCA1-210ENST00000471181 hADV29S1A0JD25 119 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 FAM90A26D6RGX4 464 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 PTP4A3O75365 173 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 TCRAP04437 139 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 UMODP07911 640 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 UCP3P55916 312 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM258P61165 79 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 PSMG4Q5JS54 123 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 SLC50A1Q9BRV3 221 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 GTSF1LQ9H1H1 148 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 SPEF2Q9C093 1822 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 VN1R4Q7Z5H5 301 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 ZNRF1Q8ND25 227 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 KLF14Q8TD94 323 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-210ENST00000471181 DOCK2Q92608 1830 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 TRGV1A0A0A0MS02 117 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 A0A0J9YW62 118 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 LRP10Q7Z4F1 713 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 RFLNBQ8N5W9 214 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 RNASE7Q9H1E1 156 aaKnown RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 PRDM13Q9H4Q3 707 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 NRN1Q9NPD7 142 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 NAV1Q8NEY1 1877 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 AHRRA9YTQ3 701 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 SERF1AO75920 110 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 GATA2P23769 480 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 IGFBP6P24592 240 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 ERCC8Q13216 396 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 PRR31Q5SQ13 230 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 Q6AWC8 147 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 ZNF474Q6S9Z5 364 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 LOC102723996A0A087X1L8 192 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 A0A1W2PPC1 479 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 ZNF660Q6AZW8 331 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 BAALCQ8WXS3 180 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 SPSB2Q99619 263 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 SCRT1Q9BWW7 348 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 TRAV14DV4A0A0A6YYC5 116 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 PRR19A6NJB7 356 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 EFEMP2O95967 443 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 DUTP33316 252 aaKnown RBP5.82□□□□□ -1.48
BRCA1-210ENST00000471181 SEC11AP67812 179 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 ZAR1Q86SH2 424 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 PAPPA2Q9BXP8 1791 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 OTORQ9NRC9 128 aa5.82□□□□□ -1.48
BRCA1-210ENST00000471181 B9A039 149 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 FXYD1O00168 92 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 PLA2G10O15496 165 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 ZIC1Q15915 447 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TEX43Q6ZNM6 134 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 ASCL2Q99929 193 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM30AQ9NV96 361 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TCHHQ07283 1943 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 ARID1BQ8NFD5 2236 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TRAV12-1A0A0B4J245 112 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 LINC00587B1AMM8 73 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 SPINK8P0C7L1 97 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 DANCRP0C864 163 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 DRAM1Q8N682 238 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 THAP8Q8NA92 274 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 OR10W1Q8NGF6 305 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 PRSS22Q9GZN4 317 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 METRNQ9UJH8 293 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TRAV9-2A0A087WT02 112 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 IGHG3P01860 377 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 CRYBA2P53672 197 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 NANOS3P60323 173 aaKnown RBP5.81□□□□□ -1.48
BRCA1-210ENST00000471181 HAMPP81172 84 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 LAGE3Q14657 143 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 FAM27BQ5VT28 67 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 LCNL1Q6ZST4 164 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 HAPLN4Q86UW8 402 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 MSRB3Q8IXL7 192 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 NDUFAF3Q9BU61 184 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 IGHV1-45A0A0A0MS14 117 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 A8MXK9 166 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 HSD52Q0P140 79 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 STPG1Q5TH74 334 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 DMRTC2Q8IXT2 367 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-210ENST00000471181 YBX2Q9Y2T7 364 aaKnown RBP5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TRACP01848 142 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM187Q14656 261 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 SS18Q15532 418 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
BRCA1-210ENST00000471181 ZNF721Q8TF20 911 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms