RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 OR10P1Q8NGE3 313 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 OR5C1Q8NGR4 320 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 BSCL2Q96G97 398 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-203ENST00000470339 GGACTQ9BVM4 153 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF471Q9BX82 626 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-203ENST00000470339 YAE1D1Q9NRH1 226 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 ACANP16112 2415 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 OR13C7P0DN81 318 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 RNASE2P10153 161 aaKnown RBP12□□□□□ -0.49
COL4A5-203ENST00000470339 IFITM2Q01629 132 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 SCGB2A2Q13296 93 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF266Q14584 549 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 CLEC9AQ6UXN8 241 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 HAPLN4Q86UW8 402 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 ATP5SQ99766 215 aa12□□□□□ -0.49
COL4A5-203ENST00000470339 IGHV7-81A0A0B4J1V7 117 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TSPAN9O75954 239 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
COL4A5-203ENST00000470339 SRP14P37108 136 aaKnown RBP11.99□□□□□ -0.49
COL4A5-203ENST00000470339 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 ARL16Q0P5N6 197 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TEX261Q6UWH6 196 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 ETV3LQ6ZN32 361 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM219Q86XT9 240 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM217Q8N7C4 229 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 ARPC1AQ92747 370 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 PHYHIPLQ96FC7 376 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 ARV1Q9H2C2 271 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 WFDC1Q9HC57 220 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 SVEP1Q4LDE5 3571 aa11.99□□□□□ -0.49
COL4A5-203ENST00000470339 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 PRSS46E5RG02 174 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 FNDC10F2Z333 226 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 RGS13O14921 159 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 AMY1AP04745 511 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 IFNA4P05014 189 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 RPL7L1Q6DKI1 246 aaKnown RBP11.98□□□□□ -0.49
COL4A5-203ENST00000470339 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF767PQ75MW2 155 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 BAP18Q8IXM2 172 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 OR1L6Q8NGR2 347 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
COL4A5-203ENST00000470339 C22orf15Q8WYQ4 148 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM68Q96MH6 324 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF48Q96MX3 618 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-203ENST00000470339 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
COL4A5-203ENST00000470339 PARD6GQ9BYG4 376 aaPredicted RBP11.98□□□□□ -0.49
COL4A5-203ENST00000470339 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
COL4A5-203ENST00000470339 IFNA7P01567 189 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 IFNA5P01569 189 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 CRYGCP07315 174 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
COL4A5-203ENST00000470339 DLK1P80370 383 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 CLINT1Q14677 625 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 LY6EQ16553 131 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
COL4A5-203ENST00000470339 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM86BQ8N661 226 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF680Q8NEM1 530 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 P2RX4Q99571 388 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 GINS3Q9BRX5 216 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM147Q9BVK8 224 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 VPREB3Q9UKI3 123 aa11.97□□□□□ -0.49
COL4A5-203ENST00000470339 NPIPB5A8MRT5 1133 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CORTO00230 105 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-203ENST00000470339 AREGP15514 252 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CTRB1P17538 263 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CRIP2P52943 208 aaPredicted RBP11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 TTC9CQ8N5M4 171 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 UQCC1Q9NVA1 299 aa11.96□□□□□ -0.49
COL4A5-203ENST00000470339 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
COL4A5-203ENST00000470339 CYB5BO43169 146 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 LY6G6DO95868 133 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 CFDP00746 253 aaPredicted RBP11.95□□□□□ -0.5
COL4A5-203ENST00000470339 IGHG2P01859 326 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 CD99P14209 185 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 NDPQ00604 133 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 AKIRIN2Q53H80 203 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
COL4A5-203ENST00000470339 MPDU1O75352 247 aa11.94□□□□□ -0.5
COL4A5-203ENST00000470339 SEC11BP0C7V7 166 aa11.94□□□□□ -0.5
COL4A5-203ENST00000470339 MDKP21741 143 aaPredicted RBP11.94□□□□□ -0.5
COL4A5-203ENST00000470339 EXOSC2Q13868 293 aaKnown RBP11.94□□□□□ -0.5
COL4A5-203ENST00000470339 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
COL4A5-203ENST00000470339 ASPHD1Q5U4P2 390 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms