RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-211	ENST00000470199	S100Z	Q8WXG8	99 aa		13.72	□□□□□ -0.21
LMNA-211	ENST00000470199	CCDC32	Q9BV29	185 aa		13.72	□□□□□ -0.21
LMNA-211	ENST00000470199	PEF1	Q9UBV8	284 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-211	ENST00000470199	IGHV3-21	A0A0B4J1V1	117 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	LYRM1	O43325	122 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	VAMP1	P23763	118 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	KPRP	Q5T749	579 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	THOC7	Q6I9Y2	204 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	C11orf87	Q6NUJ2	197 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	SLC25A24	Q6NUK1	477 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	CCDC140	Q96MF4	163 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	C7orf50	Q9BRJ6	194 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	RANGRF	Q9HD47	186 aa	Predicted RBP	13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	CACNG5	Q9UF02	275 aa		13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	F11R	Q9Y624	299 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-211	ENST00000470199	CENPX	A8MT69	81 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	PPP5D1	E7EU14	171 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	BMPR1B	O00238	502 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	NXPH3	O95157	252 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	SFT2D2	O95562	160 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	DHFR	P00374	187 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	IFNA17	P01571	189 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	ANXA7	P20073	488 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	KRTAP10-11	P60412	298 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	IFITM3	Q01628	133 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	OR2C3	Q8N628	320 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	IL22RA2	Q969J5	263 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	TBC1D24	Q9ULP9	559 aa		13.7	□□□□□ -0.22
LMNA-211	ENST00000470199	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	SEC14L6	B5MCN3	397 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	OVOL1	O14753	267 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	HLA-A	P01891	365 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	HIST1H1B	P16401	226 aa	Known RBP	13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	ZNF846	Q147U1	533 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	NMS	Q5H8A3	153 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	FAM219A	Q8IW50	185 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	LGI3	Q8N145	548 aa		13.69	□□□□□ -0.22
LMNA-211	ENST00000470199	NOTCH1	P46531	2555 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199		A0A0B4J2A0	478 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	ANXA3	P12429	323 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	AARD	Q4LEZ3	155 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	CLEC19A	Q6UXS0	136 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	PLEKHA3	Q9HB20	300 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	ZC4H2	Q9NQZ6	224 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	SHPK	Q9UHJ6	478 aa		13.68	□□□□□ -0.22
LMNA-211	ENST00000470199	NOTCH3	Q9UM47	2321 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	C9orf170	A2RU37	121 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	DUS4L	O95620	317 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	SYNJ2BP	P57105	145 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	KLF5	Q13887	457 aa	Predicted RBP	13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	ZNF502	Q8TBZ5	544 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	EEF1AKMT3	Q96AZ1	226 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	MCRIP2	Q9BUT9	160 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	WDR12	Q9GZL7	423 aa	Known RBP	13.67	□□□□□ -0.22
LMNA-211	ENST00000470199	DNAH3	Q8TD57	4116 aa		13.67	□□□□□ -0.22
LMNA-211	ENST00000470199		K7EIM0	57 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	UPK1B	O75841	260 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	IGHV3-48	P01763	117 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	OR4E1	P0C645	316 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	SULT1A3	P0DMM9	295 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	SULT1A4	P0DMN0	295 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	HOXA1	P49639	335 aa	Predicted RBP	13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	OR1P1	Q8NH06	330 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	PDCD10	Q9BUL8	212 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	C20orf85	Q9H1P6	137 aa		13.66	□□□□□ -0.22
LMNA-211	ENST00000470199	TRAV6	A0A075B6T7	132 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	OR2C1	O95371	312 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	TCRB	P04435	133 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	ZP3	P21754	424 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	SPCS3	P61009	180 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	SRPX	P78539	464 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	ERH	P84090	104 aa	Known RBP	13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	RPEL1	Q2QD12	228 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	C9orf66	Q5T8R8	295 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	ACSM6	Q6P461	480 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	HAPLN4	Q86UW8	402 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	LRTM2	Q8N967	370 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	ZNF114	Q8NC26	417 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	OR52B4	Q8NGK2	314 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	SCARB1	Q8WTV0	552 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199	MISP3	Q96FF7	219 aa		13.65	□□□□□ -0.22
LMNA-211	ENST00000470199		F8W735	103 aa	Predicted RBP	13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	INS-IGF2	F8WCM5	200 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	CLEC3B	P05452	202 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	HOXB5	P09067	269 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	RNASE2	P10153	161 aa	Known RBP	13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	EDN2	P20800	178 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	GPR183	P32249	361 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	ARL3	P36405	182 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	UBE2M	P61081	183 aa	Known RBP	13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	EGFEM1P	Q0D2K5	195 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	DHRS2	Q13268	280 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	ASAH1	Q13510	395 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	SMCO1	Q147U7	214 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	IL34	Q6ZMJ4	242 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	LYG2	Q86SG7	212 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	OR52E5	Q8NH55	327 aa		13.64	□□□□□ -0.23
LMNA-211	ENST00000470199	CXorf58	Q96LI9	332 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms