RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 NR2C2APQ86WQ0 139 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 VKORC1L1Q8N0U8 176 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 RFLNBQ8N5W9 214 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 TEX45Q8NA69 505 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 MRPL30Q8TCC3 161 aaKnown RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM171Q8WVE6 324 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 GTSF1Q8WW33 167 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 PPDPFLQ8WWR9 84 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF501Q96CX3 271 aaPredicted RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 SLC25A38Q96DW6 304 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 RBMXL1Q96E39 390 aaKnown RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 PLA2G12BQ9BX93 195 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 REEP1Q9H902 201 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 SCRT2Q9NQ03 307 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 RNF7Q9UBF6 113 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 KLF13Q9Y2Y9 288 aaPredicted RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 FIS1Q9Y3D6 152 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 CSAG2Q9Y5P2 127 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 DNAJC15Q9Y5T4 150 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 TRPM7Q96QT4 1865 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 EVPLQ92817 2033 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 DEPDC5O75140 1603 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ZFC3H1O60293 1989 aaKnown RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 CACNA1BQ00975 2339 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 SZT2Q5T011 3432 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 A0A0U1RQV1 116 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 C3orf85A0A1B0GTC6 90 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 TCRBV7S3A2A0A539 114 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF732B4DXR9 585 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 M0QYG6 137 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 SNCGO76070 127 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 APOMO95445 188 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 CRYGSP22914 178 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 GALR1P47211 349 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 PSMB3P49720 205 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 FOXA3P55318 350 aaPredicted RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 PPP1CAP62136 330 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 TRIP6Q15654 476 aaKnown RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 ANXA2RQ3ZCQ2 193 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 ETDBQ3ZM63 59 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 MS4A13Q5J8X5 152 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 FAM90A2PQ658T7 463 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 RPL7L1Q6DKI1 246 aaKnown RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 DMKNQ6E0U4 476 aaPredicted RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 CYP2G1PQ6ZSU1 146 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 PRSS41Q7RTY9 318 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 RPS19BP1Q86WX3 136 aaKnown RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 SGPP2Q8IWX5 399 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 PIANPQ8IYJ0 282 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 C10orf126Q8N4M7 172 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 APCDD1LQ8NCL9 501 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 OR10G8Q8NGN5 311 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 OR9G1Q8NH87 305 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 SGMS2Q8NHU3 365 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 RNF128Q8TEB7 428 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 LSM10Q969L4 123 aaKnown RBP4.16□□□□□ -1.74
COL3A1-205ENST00000470167 PGLYRP3Q96LB9 341 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 FOXC2Q99958 501 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 CST11Q9H112 138 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 NAA60Q9H7X0 242 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 STARD5Q9NSY2 213 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 FZR1Q9UM11 496 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 VSIG4Q9Y279 399 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF835Q9Y2P0 537 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 NEUROG3Q9Y4Z2 214 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 RREB1Q92766 1687 aa4.16□□□□□ -1.74
COL3A1-205ENST00000470167 MYO18AQ92614 2054 aaKnown RBP4.15□□□□□ -1.74
COL3A1-205ENST00000470167 ATRXP46100 2492 aa4.15□□□□□ -1.74
COL3A1-205ENST00000470167 hCG_1818297A0A087WSY0 165 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV1-2A0A0B4J238 106 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 TRAV1-1A0A0B4J248 108 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 ADM5C9JUS6 153 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 E9PLD3 99 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 C11orf98E9PRG8 122 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 K7EQS6 105 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 M0R1B8 84 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 IGHV3-7P01780 117 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 OR5AL1P0C617 328 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 MDKP21741 143 aaPredicted RBP4.15□□□□□ -1.75
COL3A1-205ENST00000470167 INSL3P51460 131 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 PPP1CBP62140 327 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 SRYQ05066 204 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 KLF5Q13887 457 aaPredicted RBP4.15□□□□□ -1.75
COL3A1-205ENST00000470167 CDSNQ15517 529 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 LY6KQ17RY6 165 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 NMSQ5H8A3 153 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 FAM201AQ5SY85 155 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 MRPL2Q5T653 305 aaKnown RBP4.15□□□□□ -1.75
COL3A1-205ENST00000470167 C12orf73Q69YU5 71 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 ACP7Q6ZNF0 438 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 Q6ZRU5 148 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 RFLNAQ6ZTI6 216 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 C2orf91Q6ZV80 131 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 HAPLN4Q86UW8 402 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 CIARTQ8N365 385 aaPredicted RBP4.15□□□□□ -1.75
COL3A1-205ENST00000470167 OR8B3Q8NGG8 313 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 MYOZ3Q8TDC0 251 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 SSC4DQ8WTU2 575 aa4.15□□□□□ -1.75
COL3A1-205ENST00000470167 MRPL24Q96A35 216 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms