RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
C4A-250ENST00000469975 C5orf66Q9H5L9 145 aa12.51□□□□□ -0.41
C4A-250ENST00000469975 A0A087WXM4 84 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 CYB5BO43169 146 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 IGHV3-48P01763 117 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 VBP1P61758 197 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 TSPAN5P62079 268 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 ODF3L2Q3SX64 289 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
C4A-250ENST00000469975 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
C4A-250ENST00000469975 DAZ1Q9NQZ3 744 aaKnown RBP12.5□□□□□ -0.41
C4A-250ENST00000469975 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
C4A-250ENST00000469975 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 C15orf61A6NNL5 157 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 M0QYG6 137 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 NDUFA4O00483 81 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 TSPAN4O14817 238 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 HPGDSO60760 199 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 IZUMO4Q1ZYL8 232 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 DEFB135Q30KP9 77 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 SLC38A6Q8IZM9 456 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 MISP3Q96FF7 219 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
C4A-250ENST00000469975 FUNDC2Q9BWH2 189 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 TMEM14BQ9NUH8 114 aa12.49□□□□□ -0.41
C4A-250ENST00000469975 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 CTSDP07339 412 aaPredicted RBP12.48□□□□□ -0.41
C4A-250ENST00000469975 CTSGP08311 255 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
C4A-250ENST00000469975 ELK1P19419 428 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 ZNF124Q15973 351 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 SPINK9Q5DT21 86 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 SPSB3Q6PJ21 355 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 MRGPRFQ96AM1 343 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 VCX3AQ9NNX9 186 aa12.48□□□□□ -0.41
C4A-250ENST00000469975 I3L2K1 104 aa12.47□□□□□ -0.41
C4A-250ENST00000469975 APOA1P02647 267 aa12.47□□□□□ -0.41
C4A-250ENST00000469975 PI3P19957 117 aa12.47□□□□□ -0.41
C4A-250ENST00000469975 OR5B3Q8NH48 314 aa12.47□□□□□ -0.41
C4A-250ENST00000469975 RNF2Q99496 336 aa12.47□□□□□ -0.41
C4A-250ENST00000469975 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 SMIM31A0A1B0GVY4 71 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 TNFAIP8O95379 198 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 RCVRNP35243 200 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 TFPI2P48307 235 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 LAMTOR1Q6IAA8 161 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 H2BFWTQ7Z2G1 175 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 CADM3Q8N126 398 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 OR1P1Q8NH06 330 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 OR4A16Q8NH70 328 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 NAA50Q9GZZ1 169 aaKnown RBP12.46□□□□□ -0.41
C4A-250ENST00000469975 FKBP11Q9NYL4 201 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 SMPXQ9UHP9 88 aa12.46□□□□□ -0.41
C4A-250ENST00000469975 CXorf65A6NEN9 183 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 K7EMT4 169 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 SPRY2O43597 315 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 YIF1AO95070 293 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 MT-CO2P00403 227 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 APOC4P55056 127 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 LYG2Q86SG7 212 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 PINX1Q96BK5 328 aaKnown RBP12.45□□□□□ -0.42
C4A-250ENST00000469975 TSC22D3Q99576 134 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 SCPEP1Q9HB40 452 aa12.45□□□□□ -0.42
C4A-250ENST00000469975 IGHV7-4-1A0A0J9YVY3 117 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 OR4C46A6NHA9 309 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 C15orf62A8K5M9 175 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 CHEK1O14757 476 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 MFAP4P55083 255 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 UCP3P55916 312 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 PRCDQ00LT1 54 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 TMEM116Q8NCL8 245 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 ATP6V0BQ99437 205 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 RHPN1-AS1Q9BWJ2 59 aa12.44□□□□□ -0.42
C4A-250ENST00000469975 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 NUPL2O15504 423 aaKnown RBP12.43□□□□□ -0.42
C4A-250ENST00000469975 IGKV1-5P01602 117 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 PGAM2P15259 253 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 S100GP29377 79 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 FCGR2BP31994 310 aaPredicted RBP12.43□□□□□ -0.42
C4A-250ENST00000469975 Q6ZWC4 215 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 CMTM3Q96MX0 182 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 NXF2Q9GZY0 626 aaKnown RBP12.43□□□□□ -0.42
C4A-250ENST00000469975 FAM212BQ9NTI7 297 aaPredicted RBP12.43□□□□□ -0.42
C4A-250ENST00000469975 KLK11Q9UBX7 282 aa12.43□□□□□ -0.42
C4A-250ENST00000469975 BMI1P35226 326 aa12.42□□□□□ -0.42
C4A-250ENST00000469975 HSPE1P61604 102 aaKnown RBP12.42□□□□□ -0.42
C4A-250ENST00000469975 RELQ04864 619 aaPredicted RBP12.42□□□□□ -0.42
C4A-250ENST00000469975 STPG3Q8N7X2 389 aa12.42□□□□□ -0.42
C4A-250ENST00000469975 ZNF114Q8NC26 417 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms