RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 NOL4LQ96MY1 436 aaPredicted RBP16.3■□□□□ 0.2
BRAF-202ENST00000469930 MAGT1Q9H0U3 335 aa16.3■□□□□ 0.2
BRAF-202ENST00000469930 HEYLQ9NQ87 328 aaPredicted RBP16.3■□□□□ 0.2
BRAF-202ENST00000469930 F11RQ9Y624 299 aaKnown RBP16.3■□□□□ 0.2
BRAF-202ENST00000469930 SETD2Q9BYW2 2564 aaPredicted RBP16.3■□□□□ 0.2
BRAF-202ENST00000469930 TSC22D2O75157 780 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 NXPH3O95157 252 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 SCGB1D2O95969 90 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 PVALBP20472 110 aaPredicted RBP16.29■□□□□ 0.2
BRAF-202ENST00000469930 SUB1P53999 127 aaKnown RBP eCLIP16.29■□□□□ 0.2
BRAF-202ENST00000469930 RPP30P78346 268 aaKnown RBP16.29■□□□□ 0.2
BRAF-202ENST00000469930 SLC35B1P78383 322 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 FOXL1Q12952 345 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 ECSCRQ19T08 205 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 TMEM95Q3KNT9 176 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 C2orf83Q53S99 150 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 SPINK9Q5DT21 86 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 RNF152Q8N8N0 203 aa16.29■□□□□ 0.2
BRAF-202ENST00000469930 hCG_2014768A0A024R1R8 64 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 CYB5BO43169 146 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 RNASE2P10153 161 aaKnown RBP16.28■□□□□ 0.2
BRAF-202ENST00000469930 HIST1H1BP16401 226 aaKnown RBP16.28■□□□□ 0.2
BRAF-202ENST00000469930 SNCAP37840 140 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 PRSS54Q6PEW0 395 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.28■□□□□ 0.2
BRAF-202ENST00000469930 ST6GAL2Q96JF0 529 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 P2RX4Q99571 388 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 RNF126Q9BV68 326 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 LINC00527Q9UJ94 153 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 LSM5Q9Y4Y9 91 aaKnown RBP16.28■□□□□ 0.2
BRAF-202ENST00000469930 NF1P21359 2839 aa16.28■□□□□ 0.2
BRAF-202ENST00000469930 TRBV9A0A0B4J1U6 114 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 PSMB11A5LHX3 300 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 E5RGE8 158 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 H0YIZ8 118 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 SSSCA1O60232 199 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 SOX15O60248 233 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 TMEM50AO95807 157 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 ELANEP08246 267 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 PROK1P58294 105 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 SRSF2Q01130 221 aaKnown RBP16.27■□□□□ 0.2
BRAF-202ENST00000469930 CD83Q01151 205 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 FOXE3Q13461 319 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 TCTE3Q8IZS6 198 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 SLC24A4Q8NFF2 622 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 SLA2Q9H6Q3 261 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 RNF114Q9Y508 228 aa16.27■□□□□ 0.2
BRAF-202ENST00000469930 CORTO00230 105 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 SLC25A4P12235 298 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 PSMB8P28062 276 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 S100A10P60903 97 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 RPL23AP62750 156 aaKnown RBP16.26■□□□□ 0.19
BRAF-202ENST00000469930 TEX38Q6PEX7 206 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 CENPVQ7Z7K6 275 aaPredicted RBP16.26■□□□□ 0.19
BRAF-202ENST00000469930 OR5T1Q8NG75 326 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 OR2T35Q8NGX2 323 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 FANCD2OSQ96PS1 177 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 PSENENQ9NZ42 101 aa16.26■□□□□ 0.19
BRAF-202ENST00000469930 IGLV11-55A0A075B6I3 123 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 TRAV14DV4A0A0A6YYC5 116 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 L7N2F9 121 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 CCNKO75909 580 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 SCAF4O95104 1147 aaKnown RBP16.25■□□□□ 0.19
BRAF-202ENST00000469930 APELAP0DMC3 54 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 IAPPP10997 89 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 NPY1RP25929 384 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 P2RY1P47900 373 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 VAMP2P63027 116 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 C11orf87Q6NUJ2 197 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 TMEM14EPQ6UXP3 125 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 WFDC12Q8WWY7 111 aa16.25■□□□□ 0.19
BRAF-202ENST00000469930 TAF15Q92804 592 aaKnown RBP eCLIP16.25■□□□□ 0.19
BRAF-202ENST00000469930 RANGRFQ9HD47 186 aaPredicted RBP16.25■□□□□ 0.19
BRAF-202ENST00000469930 STRAPQ9Y3F4 350 aaKnown RBP16.25■□□□□ 0.19
BRAF-202ENST00000469930 C15orf62A8K5M9 175 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 G3V3Q6 166 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 REG1AP05451 166 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 DEFA4P12838 97 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 MDKP21741 143 aaPredicted RBP16.24■□□□□ 0.19
BRAF-202ENST00000469930 MFAP2P55001 183 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 KRTAP24-1Q3LI83 254 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 LRRC37A5PQ49AS3 106 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 AKAP14Q86UN6 197 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 KLHDC1Q8N7A1 406 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 THAP6Q8TBB0 222 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 MYOZ3Q8TDC0 251 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 RNASEH2CQ8TDP1 164 aaKnown RBP16.24■□□□□ 0.19
BRAF-202ENST00000469930 TMEM170AQ8WVE7 144 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
BRAF-202ENST00000469930 OR5AC2Q9NZP5 309 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 THYN1Q9P016 225 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 DMRT1Q9Y5R6 373 aa16.24■□□□□ 0.19
BRAF-202ENST00000469930 IFNA10P01566 189 aa16.23■□□□□ 0.19
BRAF-202ENST00000469930 RAB11AP62491 216 aa16.23■□□□□ 0.19
BRAF-202ENST00000469930 TMEM65Q6PI78 240 aa16.23■□□□□ 0.19
BRAF-202ENST00000469930 NECAP1Q8NC96 275 aa16.23■□□□□ 0.19
BRAF-202ENST00000469930 FAM223BA6NKX1 122 aa16.22■□□□□ 0.19
BRAF-202ENST00000469930 RAB9AP51151 201 aa16.22■□□□□ 0.19
BRAF-202ENST00000469930 EXOSC2Q13868 293 aaKnown RBP16.22■□□□□ 0.19
BRAF-202ENST00000469930 Q5BKY6 102 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms