RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 AKAIN1P0CW23 69 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 ANXA3P12429 323 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 AADACP22760 399 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 BLCAPP62952 87 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 DIAPH2-AS1Q14236 149 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 SPCS2Q15005 226 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 ECSCRQ19T08 205 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 TRIQKQ629K1 86 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 CCBE1Q6UXH8 406 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-208ENST00000469585 PPP1R27Q86WC6 154 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 MMD2Q8IY49 270 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 STPG2Q8N412 459 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 ARRDC1Q8N5I2 433 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 GVQW1Q8N7I0 195 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 OR51H1Q8NH63 302 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 GRPEL2Q8TAA5 225 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 PIFOQ8TCI5 191 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 ARPC1AQ92747 370 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 DGCR14Q96DF8 476 aaKnown RBP4.87□□□□□ -1.63
PTCD3-208ENST00000469585 CLCC1Q96S66 551 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 TSC22D3Q99576 134 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 SPIN2AQ99865 258 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 PRRT1Q99946 306 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 CITED1Q99966 193 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 SPIN2BQ9BPZ2 258 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 NAA50Q9GZZ1 169 aaKnown RBP4.87□□□□□ -1.63
PTCD3-208ENST00000469585 OR51J1Q9H342 316 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 MCUBQ9NWR8 336 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 FKBP11Q9NYL4 201 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 COPZ2Q9P299 210 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 CACFD1Q9UGQ2 172 aa4.87□□□□□ -1.63
PTCD3-208ENST00000469585 TRAV41A0A0B4J266 112 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 A0A0G2JLM5 398 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 C13orf42A0A1B0GVH6 325 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 TNFSF12O43508 249 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 SSX5O60225 188 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 SCGB2A1O75556 95 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 DUS4LO95620 317 aaKnown RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 HPRT1P00492 218 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 CT45A6P0DMU7 189 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 CT45A5P0DMU8 189 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 CT45A7P0DMV0 189 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 DEFA4P12838 97 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 NQO2P16083 231 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 PTBP1P26599 531 aaKnown RBP eCLIP4.86□□□□□ -1.637e-11■■■■■ 35.2
PTCD3-208ENST00000469585 DUTP33316 252 aaKnown RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 MAS1LP35410 378 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 RAB25P57735 213 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 FXYD3Q14802 87 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 TNXAQ16473 311 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 OR2B11Q5JQS5 317 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 LDLRAD2Q5SZI1 272 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 STEAP1BQ6NZ63 245 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF562Q6V9R5 426 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 TRPT1Q86TN4 253 aaKnown RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 LAX1Q8IWV1 398 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 SPAG16Q8N0X2 631 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 TOMM5Q8N4H5 51 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 FAM71E2Q8N5Q1 922 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 STPG4Q8N801 248 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 Q8N9W7 124 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 TMEM229BQ8NBD8 167 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 NPBQ8NG41 125 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 OR4A5Q8NH83 315 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 DYNC2LI1Q8TCX1 351 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 GPX8Q8TED1 209 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 DEDD2Q8WXF8 326 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 MOB3AQ96BX8 217 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 ZNF486Q96H40 463 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 AGMATQ9BSE5 352 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 COMMD5Q9GZQ3 224 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 FBXL15Q9H469 300 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 ENY2Q9NPA8 101 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 COMMD9Q9P000 198 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 THYN1Q9P016 225 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 MTFP1Q9UDX5 166 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 FOXA2Q9Y261 457 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-208ENST00000469585 KCNIP3Q9Y2W7 256 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 SIGLEC9Q9Y336 463 aa4.86□□□□□ -1.63
PTCD3-208ENST00000469585 IGKV1-6A0A0C4DH72 117 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 A0A1W2PN81 502 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 H3BUA1 57 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 ARPC1BO15143 372 aaKnown RBP4.85□□□□□ -1.63
PTCD3-208ENST00000469585 CTDSPLO15194 276 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 RBFOX2O43251 390 aaKnown RBP eCLIP4.85□□□□□ -1.633e-7■□□□□ 9.8
PTCD3-208ENST00000469585 CIDEAO60543 219 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 OR2A4O95047 310 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 NDUFA3O95167 84 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 CA2P00918 260 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 RLN1P04808 185 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 PRSS1P07477 247 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 FRMD6-AS1P0C7T7 363 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 RPA2P15927 270 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 CHRNA7P36544 502 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 AKR1C2P52895 323 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 TAS2R31P59538 309 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 UBE2KP61086 200 aa4.85□□□□□ -1.63
PTCD3-208ENST00000469585 PSG5Q15238 335 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms