RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 LINC01551Q86U37 167 aa14.56□□□□□ -0.08
MCF2L-221ENST00000469415 OR2T10Q8NGZ9 312 aa14.56□□□□□ -0.08
MCF2L-221ENST00000469415 RPUSD1Q9UJJ7 312 aaKnown RBP14.56□□□□□ -0.08
MCF2L-221ENST00000469415 TRGV8A0A0C4DH27 118 aa14.56□□□□□ -0.08
MCF2L-221ENST00000469415 HRASP01112 189 aa14.56□□□□□ -0.08
MCF2L-221ENST00000469415 TMEM200BQ69YZ2 307 aa14.56□□□□□ -0.08
MCF2L-221ENST00000469415 IGKV1OR2-108A0A075B7D4 117 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 SEC14L6B5MCN3 397 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 LY6HO94772 140 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 RTL8BQ17RB0 113 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 FAM169BQ8N8A8 192 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 SGMS2Q8NHU3 365 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 LINC01560Q8TB33 94 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 GATCO43716 136 aaKnown RBP14.55□□□□□ -0.08
MCF2L-221ENST00000469415 TNFRSF1AP19438 455 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PACRGQ96M98 296 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-221ENST00000469415 DSCAML1Q8TD84 2053 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PPIAL4EA0A075B759 164 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 TEX50A0A1B0GTY4 177 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 NKX6-3A6NJ46 265 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PRSS46E5RG02 174 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PPIAL4DF5H284 164 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PPIAL4FP0DN26 164 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 OPRK1P41145 380 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 GAMTQ14353 236 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PRR31Q5SQ13 230 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 Q8NA96 180 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 NHLRC2Q8NBF2 726 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 OCC1Q8TAD7 63 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 C14orf144Q96I85 54 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 COMMD5Q9GZQ3 224 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 PPIAL4AQ9Y536 164 aa14.55□□□□□ -0.08
MCF2L-221ENST00000469415 TRBV24-1A0A075B6N3 115 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 TRAV5A0A0B4J249 113 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 F6UZH7 168 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 GCHFRP30047 84 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 SSBP2P81877 361 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-221ENST00000469415 SSX2Q16385 188 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 KRTCAP3Q53RY4 240 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 RITA1Q96K30 269 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 CTDSP1Q9GZU7 261 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 TMEM14BQ9NUH8 114 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 A0A1B0GWJ7 208 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 FAM90A27PA6NNH2 459 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 ZNF705GA8MUZ8 300 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-221ENST00000469415 FRMD6-AS1P0C7T7 363 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 ASCL5Q7RTU5 278 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 C1orf174Q8IYL3 243 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 ZNF439Q8NDP4 499 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 ZNF714Q96N38 554 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 UHRF2Q96PU4 802 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 IMMP2LQ96T52 175 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 SCNM1Q9BWG6 230 aa14.54□□□□□ -0.08
MCF2L-221ENST00000469415 DVL1O14640 695 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 STAG3L2P0CL84 134 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 STAG3L3P0CL85 134 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 GATA4P43694 442 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 RAB31Q13636 194 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 SGK494Q96LW2 274 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 TPSG1Q9NRR2 321 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 ZNF729A6NN14 1252 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-221ENST00000469415 GRNP28799 593 aaKnown RBP14.53□□□□□ -0.08
MCF2L-221ENST00000469415 CR1LQ2VPA4 569 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 HLA-DRB5Q30154 266 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 HCP5Q6MZN7 132 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 HIST1H2BLQ99880 126 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 SPG11Q96JI7 2443 aa14.53□□□□□ -0.08
MCF2L-221ENST00000469415 SLC25A17O43808 307 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 CRYBB3P26998 211 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 SLC25A48Q6ZT89 311 aaKnown RBP14.52□□□□□ -0.08
MCF2L-221ENST00000469415 FAM222BQ8WU58 562 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 NABP2Q9BQ15 211 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 TMEM242Q9NWH2 141 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 MDFIC2A0A1B0GVS7 189 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 UPK2O00526 184 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 CXorf1O96002 111 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 CD33P20138 364 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 IL3RAP26951 378 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 TCL1AP56279 114 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 SRD5A3Q9H8P0 318 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 CTSZQ9UBR2 303 aa14.52□□□□□ -0.08
MCF2L-221ENST00000469415 GRIFINA4D1Z8 144 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 PHOX2AO14813 284 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 KIR2DS2P43631 304 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 MORN5Q5VZ52 161 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 TGIF2LXQ8IUE1 241 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 SPACA3Q8IXA5 215 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 MISP3Q96FF7 219 aa14.52□□□□□ -0.09
MCF2L-221ENST00000469415 NDUFB3O43676 98 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 SSTP61278 116 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 RHOBP62745 196 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 FXYD3Q14802 87 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 OR52E5Q8NH55 327 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 TMEM106BQ9NUM4 274 aa14.51□□□□□ -0.09
MCF2L-221ENST00000469415 FOXA2Q9Y261 457 aaPredicted RBP14.51□□□□□ -0.09
MCF2L-221ENST00000469415 SUMO1P63165 101 aaKnown RBP14.51□□□□□ -0.09
MCF2L-221ENST00000469415 LSM4Q9Y4Z0 139 aaKnown RBP14.51□□□□□ -0.09
MCF2L-221ENST00000469415 APOA2P02652 100 aa14.5□□□□□ -0.09
MCF2L-221ENST00000469415 COX7A1P24310 79 aa14.5□□□□□ -0.09
MCF2L-221ENST00000469415 FLYWCH2Q96CP2 140 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms