RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 RAB7AP51149 207 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 RBM11P57052 281 aaKnown RBP4.33□□□□□ -1.72
UBE3C-204ENST00000469336 FXYD4P59646 89 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 UBE2G2P60604 165 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 ARF6P62330 175 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 RBX1P62877 108 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 DEFB103AP81534 67 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 RUNX1Q01196 453 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF154Q13106 437 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 OR5I1Q13606 314 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 NSDHLQ15738 373 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF726P1Q15940 193 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 PMCHL1Q16048 86 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 LPAL2Q16609 132 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 PRSS8Q16651 343 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 FAM162BQ5T6X4 162 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 TMEM14EPQ6UXP3 125 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 C19orf35Q6ZS72 473 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 GCNT2Q8N0V5 402 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 OR5T1Q8NG75 326 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 OR5AU1Q8NGC0 362 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 SLC37A2Q8TED4 501 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 TMEM54Q969K7 222 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF799Q96GE5 643 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 TMEM147Q9BVK8 224 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 LIME1Q9H400 295 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 PNO1Q9NRX1 252 aaKnown RBP4.33□□□□□ -1.72
UBE3C-204ENST00000469336 MED29Q9NX70 200 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 TAAR3PQ9P1P4 343 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 PIGLQ9Y2B2 252 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
UBE3C-204ENST00000469336 LRP4O75096 1905 aa4.33□□□□□ -1.72
UBE3C-204ENST00000469336 MDFIC2A0A1B0GVS7 189 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 CD300LBA8K4G0 201 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 C5orf67F2Z3F1 127 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 NDUFS8O00217 210 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 SIRPB1O00241 398 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 TNFSF11O14788 317 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 RER1O15258 196 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 SLC31A1O15431 190 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 CBR3O75828 277 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 SERPINE2P07093 398 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 MMP7P09237 267 aaPredicted RBP4.32□□□□□ -1.72
UBE3C-204ENST00000469336 GZMHP20718 246 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 CRYGSP22914 178 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 TUBG1P23258 451 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 OMGP23515 440 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 CTRLP40313 264 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ID1P41134 155 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 GNG10P50151 68 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ERVS71-1P61550 626 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 SPIN3Q5JUX0 258 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 RASL11AQ6T310 242 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 GTSCR1Q86UQ5 136 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 C1orf174Q8IYL3 243 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 BATF2Q8N1L9 274 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 C11orf42Q8N5U0 333 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 WDR31Q8NA23 367 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF738Q8NE65 137 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 OR1K1Q8NGR3 316 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 TMEM37Q8WXS4 190 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 REEP6Q96HR9 211 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 UBE2ZQ9H832 354 aaPredicted RBP4.32□□□□□ -1.72
UBE3C-204ENST00000469336 SLC7A10Q9NS82 523 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 BET1LQ9NYM9 111 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 PSENENQ9NZ42 101 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 MRPL27Q9P0M9 148 aaKnown RBP4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ST3GAL6Q9Y274 331 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ATG2AQ2TAZ0 1938 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 ADAMTS9Q9P2N4 1935 aa4.32□□□□□ -1.72
UBE3C-204ENST00000469336 TRAV30A0A087WSZ9 112 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 IGHV1-69-2A0A0G2JMI3 117 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF816-ZNF321PA0A0X1KG74 233 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 SLC22A20A6NK97 555 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 C9JCJ5 164 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF253O75346 499 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 PGLYRP1O75594 196 aaPredicted RBP4.31□□□□□ -1.72
UBE3C-204ENST00000469336 IGLV3-19P01714 112 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 IGHV3-13P01766 116 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 OR5G3P0C626 314 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 OR10J4P0C629 311 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 CRISP2P16562 243 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 FGF12P61328 243 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 PCBD1P61457 104 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 RHOBP62745 196 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 GNB2P62879 340 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 SLC38A11Q08AI6 406 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 TSPO2Q5TGU0 170 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 FAM27BQ5VT28 67 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 OR8G2PQ6IF36 304 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF818PQ6ZRF7 136 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 GAPTQ8N292 157 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 SIGLECL1Q8N7X8 197 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 ZNF709Q8N972 641 aa4.31□□□□□ -1.72
UBE3C-204ENST00000469336 ZNRF1Q8ND25 227 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms