RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TRAV24A0A0B4J272 114 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 SLC25A34Q6PIV7 304 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 TGIF2-C20orf24A0A0A6YYL0 155 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 CCL3L1P16619 93 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 TFPI2P48307 235 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
LIMS2-213ENST00000469300 MORN2Q502X0 79 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 DTX1Q86Y01 620 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 CLDN16Q9Y5I7 305 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 HAX1O00165 279 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 DLX6P56179 175 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 SAMD13Q5VXD3 122 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 SCGB1D4Q6XE38 83 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 TMEM116Q8NCL8 245 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 C21orf62Q9NYP8 219 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 HSPB7Q9UBY9 170 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 TICRRQ7Z2Z1 1910 aa12.61□□□□□ -0.39
LIMS2-213ENST00000469300 NBR2O15453 112 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 PF4P02776 101 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 REG1AP05451 166 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 GNLYP22749 145 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 MPZP25189 248 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 CTAG1AP78358 180 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 HOXA5P20719 270 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 CYP2G1PQ6ZSU1 146 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 NLRC5Q86WI3 1866 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 PROB1E7EW31 1015 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 NDUFB4O95168 129 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 PLAUP00749 431 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 IL4P05112 153 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 FBXL7Q9UJT9 491 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 ZFP30Q9Y2G7 519 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 ABCA4P78363 2273 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 ZP1P60852 638 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
LIMS2-213ENST00000469300 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
LIMS2-213ENST00000469300 OOSP1A8MZH6 123 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 TTC32Q5I0X7 151 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 MYO7BQ6PIF6 2116 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 DANCRP0C864 163 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 PEF1Q9UBV8 284 aaKnown RBP12.59□□□□□ -0.39
LIMS2-213ENST00000469300 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
LIMS2-213ENST00000469300 NIT1Q86X76 327 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 PRSS22Q9GZN4 317 aa12.59□□□□□ -0.39
LIMS2-213ENST00000469300 RPUSD1Q9UJJ7 312 aaKnown RBP12.59□□□□□ -0.39
LIMS2-213ENST00000469300 UPK2O00526 184 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 SRSF9Q13242 221 aaKnown RBP eCLIP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 FAM90A9PA6NNJ1 464 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 GPX4P36969 197 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 H3BVH4 76 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 C1QL1O75973 258 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 MGPP08493 103 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 MFAP2P55001 183 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 C2orf68Q2NKX9 166 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
LIMS2-213ENST00000469300 PAQR4Q8N4S7 273 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 IBA57Q5T440 356 aaKnown RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 ZCCHC24Q8N2G6 241 aaKnown RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
LIMS2-213ENST00000469300 TMSB15BA0A087X1C1 80 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 HEPN1Q6WQI6 88 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 CDC42EP3Q9UKI2 254 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 PARLQ9H300 379 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 PNRC2Q9NPJ4 139 aaKnown RBP12.57□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM250H0YL14 139 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 UQCRFS1P47985 274 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 HERVK_113P61574 105 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 CLDND2Q8NHS1 167 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 KLHDC3Q9BQ90 382 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
LIMS2-213ENST00000469300 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
LIMS2-213ENST00000469300 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
LIMS2-213ENST00000469300 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 WDR25Q64LD2 544 aaPredicted RBP12.56□□□□□ -0.4
LIMS2-213ENST00000469300 PRSS33Q8NF86 280 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 TUBA4BQ9H853 241 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 DUX5Q96PT3 197 aa12.56□□□□□ -0.4
LIMS2-213ENST00000469300 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 SAA1P0DJI8 122 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 GCHFRP30047 84 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 TMEM177Q53S58 311 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
LIMS2-213ENST00000469300 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
LIMS2-213ENST00000469300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms