RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 CNPY1Q3B7I2 92 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 S100ZQ8WXG8 99 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 TMEM230Q96A57 120 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 EEF1AKMT3Q96AZ1 226 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 SDHCQ99643 169 aaPredicted RBP11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 PDCD10Q9BUL8 212 aa11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
TMEM39A-205ENST00000468676 A0A0B4J293 547 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 NDUFB8O95169 186 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 IL7P13232 177 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 KLF5Q13887 457 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 TMEM187Q14656 261 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 TMEM268Q5VZI3 342 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 C19orf35Q6ZS72 473 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 ELOVL1Q9BW60 279 aa11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.37□□□□□ -0.59
TMEM39A-205ENST00000468676 IFNA17P01571 189 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 UBE2MP61081 183 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 IZUMO4Q1ZYL8 232 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 SLC25A24Q6NUK1 477 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 TMED4Q7Z7H5 227 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 LGI3Q8N145 548 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 OR2C3Q8N628 320 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 OR1P1Q8NH06 330 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 LHFPL5Q8TAF8 219 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 CCDC32Q9BV29 185 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 PTTG2Q9NZH5 202 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 SORL1Q92673 2214 aa11.36□□□□□ -0.59
TMEM39A-205ENST00000468676 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 ST8SIA3O43173 380 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 GGCTO75223 188 aaKnown RBP11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 AARDQ4LEZ3 155 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 PDLIM3Q53GG5 364 aaPredicted RBP11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 ZNF114Q8NC26 417 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 OR52E5Q8NH55 327 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 OR4C12Q96R67 309 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 ATP6V0BQ99437 205 aa11.35□□□□□ -0.59
TMEM39A-205ENST00000468676 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 DUXBA0A1W2PPF3 345 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 BMPR1BO00238 502 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 SAP30O75446 220 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 NDUFB6O95139 128 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 SNCAP37840 140 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 SYNJ2BPP57105 145 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 SPCS3P61009 180 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
TMEM39A-205ENST00000468676 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 SULT1A3P0DMM9 295 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 SULT1A4P0DMN0 295 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 VAMP1P23763 118 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 ARL3P36405 182 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 CCR6P51684 374 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 KRTAP10-11P60412 298 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 CLEC19AQ6UXS0 136 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 Q6ZRM9 215 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 ZNF502Q8TBZ5 544 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 CCDC140Q96MF4 163 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 GAR1Q9NY12 217 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 CACNG5Q9UF02 275 aa11.33□□□□□ -0.6
TMEM39A-205ENST00000468676 MFSD2BA6NFX1 497 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 SFT2D2O95562 160 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 PRB2P02812 416 aaPredicted RBP11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 CLEC3BP05452 202 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 MFAP2P55001 183 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 DCTN2Q13561 401 aaKnown RBP11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 FAM106AQ4KMX7 169 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 GPHB5Q86YW7 130 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
TMEM39A-205ENST00000468676 A0A1B0GU03 582 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 LGALS9O00182 355 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 CORTO00230 105 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 LYRM1O43325 122 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 SPSB3Q6PJ21 355 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
TMEM39A-205ENST00000468676 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms