RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 UBE2MP61081 183 aaKnown RBP15.4■□□□□ 0.06
NPHP4-206ENST00000468253 EGFEM1PQ0D2K5 195 aa15.4■□□□□ 0.06
NPHP4-206ENST00000468253 KLF5Q13887 457 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-206ENST00000468253 C9orf66Q5T8R8 295 aa15.4■□□□□ 0.06
NPHP4-206ENST00000468253 TMEM268Q5VZI3 342 aa15.4■□□□□ 0.06
NPHP4-206ENST00000468253 OR52E5Q8NH55 327 aa15.4■□□□□ 0.06
NPHP4-206ENST00000468253 CXorf58Q96LI9 332 aa15.4■□□□□ 0.06
NPHP4-206ENST00000468253 F11RQ9Y624 299 aaKnown RBP15.4■□□□□ 0.06
NPHP4-206ENST00000468253 TRBV7-1A0A0A6YYK4 115 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 A0A0B4J2A0 478 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 ANKRD34BA5PLL1 514 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 NDUFB6O95139 128 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 HOXD3P31249 432 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-206ENST00000468253 ERHP84090 104 aaKnown RBP15.39■□□□□ 0.05
NPHP4-206ENST00000468253 EXOSC2Q13868 293 aaKnown RBP15.39■□□□□ 0.05
NPHP4-206ENST00000468253 TATDN3Q17R31 274 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 IZUMO4Q1ZYL8 232 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 Q6ZRM9 215 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 C19orf35Q6ZS72 473 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 REC114Q7Z4M0 266 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 LGI3Q8N145 548 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 OR2C3Q8N628 320 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 OR1P1Q8NH06 330 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 RNASE11Q8TAA1 199 aaKnown RBP15.39■□□□□ 0.05
NPHP4-206ENST00000468253 SHPKQ9UHJ6 478 aa15.39■□□□□ 0.05
NPHP4-206ENST00000468253 DNAH3Q8TD57 4116 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 ST8SIA3O43173 380 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 CCR6P51684 374 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 SLURP1P55000 103 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 PDLIM3Q53GG5 364 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-206ENST00000468253 SLC25A24Q6NUK1 477 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 TMED4Q7Z7H5 227 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 CENPSQ8N2Z9 138 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 LRTM2Q8N967 370 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 VN1R17PQ8TDU5 208 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 EEF1AKMT3Q96AZ1 226 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 GPR146Q96CH1 333 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 ATP6V0BQ99437 205 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 DMRT1Q9Y5R6 373 aa15.38■□□□□ 0.05
NPHP4-206ENST00000468253 A0A0G2JRQ6 117 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 SEC14L6B5MCN3 397 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 PLA2G10O15496 165 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 IFNA17P01571 189 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 MECP2P51608 486 aaKnown RBP15.37■□□□□ 0.05
NPHP4-206ENST00000468253 SPCS3P61009 180 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 ZNF114Q8NC26 417 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 PDCD10Q9BUL8 212 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 PLEKHA3Q9HB20 300 aa15.37■□□□□ 0.05
NPHP4-206ENST00000468253 LINC00854A0A1B0GVQ3 168 aa15.36■□□□□ 0.05
NPHP4-206ENST00000468253 DUXBA0A1W2PPF3 345 aa15.36■□□□□ 0.05
NPHP4-206ENST00000468253 DEFA5Q01523 94 aa15.36■□□□□ 0.05
NPHP4-206ENST00000468253 ACSM6Q6P461 480 aa15.36■□□□□ 0.05
NPHP4-206ENST00000468253 GGCTO75223 188 aaKnown RBP15.35■□□□□ 0.05
NPHP4-206ENST00000468253 SFT2D2O95562 160 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 TRBV12-3P01733 135 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 BTCP35070 178 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 RPEL1Q2QD12 228 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 SLC35G3Q8N808 338 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 ELOVL1Q9BW60 279 aa15.35■□□□□ 0.05
NPHP4-206ENST00000468253 WDR12Q9GZL7 423 aaKnown RBP15.35■□□□□ 0.05
NPHP4-206ENST00000468253 BMPR1BO00238 502 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 LYRM1O43325 122 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 CLEC3BP05452 202 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 SULT1A3P0DMM9 295 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 SULT1A4P0DMN0 295 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 MFAP2P55001 183 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 ZNF846Q147U1 533 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 NMSQ5H8A3 153 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 PVRIGQ6DKI7 326 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 LYZL2Q7Z4W2 148 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 GPHB5Q86YW7 130 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 ZNF502Q8TBZ5 544 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 CACNG5Q9UF02 275 aa15.34■□□□□ 0.05
NPHP4-206ENST00000468253 A0A1B0GU03 582 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 SLC25A6P12236 298 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 VAMP1P23763 118 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 SNCAP37840 140 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 SUB1P53999 127 aaKnown RBP eCLIP15.33■□□□□ 0.04
NPHP4-206ENST00000468253 PPP1R1AQ13522 171 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 CCDC140Q96MF4 163 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 ENY2Q9NPA8 101 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 SIGLEC8Q9NYZ4 499 aa15.33■□□□□ 0.04
NPHP4-206ENST00000468253 SYNJ2BPP57105 145 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 KRTAP10-11P60412 298 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 ANKRD55Q3KP44 614 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 CLEC19AQ6UXS0 136 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 OR9G4Q8NGQ1 327 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 OR4C12Q96R67 309 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 GAR1Q9NY12 217 aaKnown RBP15.32■□□□□ 0.04
NPHP4-206ENST00000468253 PRR13Q9NZ81 148 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 TMED3Q9Y3Q3 217 aa15.32■□□□□ 0.04
NPHP4-206ENST00000468253 C9orf170A2RU37 121 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 MFSD2BA6NFX1 497 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 K7EIM0 57 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 FCGR2BP31994 310 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-206ENST00000468253 SMCO1Q147U7 214 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 IL34Q6ZMJ4 242 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 SCARB1Q8WTV0 552 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 TXN2Q99757 166 aa15.31■□□□□ 0.04
NPHP4-206ENST00000468253 FLVCR2Q9UPI3 526 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms