RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TSPAN14Q8NG11 270 aa18.18■□□□□ 0.5
PTCH1-210ENST00000468211 TMEM14BQ9NUH8 114 aa18.18■□□□□ 0.5
PTCH1-210ENST00000468211 NDUFA4O00483 81 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 IGKV1-39P01597 117 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 IGKV1D-39P04432 117 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 NCS1P62166 190 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 ODF3L2Q3SX64 289 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 SLC38A6Q8IZM9 456 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 COMMD3Q9UBI1 195 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 PRNDQ9UKY0 176 aa18.17■□□□□ 0.5
PTCH1-210ENST00000468211 C15orf61A6NNL5 157 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 CTSGP08311 255 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 Q56UQ5 140 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 TBC1D26Q86UD7 250 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 SNX29P2Q8IUI4 249 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 OR5B3Q8NH48 314 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 SEC22AQ96IW7 307 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 ATP6V0BQ99437 205 aa18.16■□□□□ 0.5
PTCH1-210ENST00000468211 A0A087WXM4 84 aa18.15■□□□□ 0.5
PTCH1-210ENST00000468211 TMEM56Q96MV1 263 aa18.15■□□□□ 0.5
PTCH1-210ENST00000468211 FKBP11Q9NYL4 201 aa18.15■□□□□ 0.5
PTCH1-210ENST00000468211 K7EMT4 169 aa18.14■□□□□ 0.49
PTCH1-210ENST00000468211 CTSDP07339 412 aaPredicted RBP18.14■□□□□ 0.49
PTCH1-210ENST00000468211 TSPAN5P62079 268 aa18.14■□□□□ 0.49
PTCH1-210ENST00000468211 DEFB135Q30KP9 77 aa18.14■□□□□ 0.49
PTCH1-210ENST00000468211 OR1P1Q8NH06 330 aa18.14■□□□□ 0.49
PTCH1-210ENST00000468211 A0A0J9YWU9 116 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 I3L2K1 104 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 IGHV3-48P01763 117 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 APOA1P02647 267 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 ELK1P19419 428 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 VBP1P61758 197 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 LAMTOR1Q6IAA8 161 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 WFDC3Q8IUB2 231 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 TSC22D3Q99576 134 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 FUNDC2Q9BWH2 189 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 VCX3AQ9NNX9 186 aa18.13■□□□□ 0.49
PTCH1-210ENST00000468211 SPRY2O43597 315 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 HPGDSO60760 199 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 Q6ZWC4 215 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 MRGPRFQ96AM1 343 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 MISP3Q96FF7 219 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 RNF2Q99496 336 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 SCPEP1Q9HB40 452 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 FAM212BQ9NTI7 297 aaPredicted RBP18.12■□□□□ 0.49
PTCH1-210ENST00000468211 SMPXQ9UHP9 88 aa18.12■□□□□ 0.49
PTCH1-210ENST00000468211 IGHV3-49A0A0A0MS15 119 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 C15orf62A8K5M9 175 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 M0QYG6 137 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 RPL35AP18077 110 aaKnown RBP18.11■□□□□ 0.49
PTCH1-210ENST00000468211 APOC4P55056 127 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 PMS2P11Q13670 270 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 IZUMO4Q1ZYL8 232 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 LPCAT3Q6P1A2 487 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 H2BFWTQ7Z2G1 175 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 LYG2Q86SG7 212 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 TP53TG1Q9Y2A0 90 aa18.11■□□□□ 0.49
PTCH1-210ENST00000468211 SMIM31A0A1B0GVY4 71 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 OR4C46A6NHA9 309 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 TNFAIP8O95379 198 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 RCVRNP35243 200 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 UCP3P55916 312 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 ZNF124Q15973 351 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 OR4A16Q8NH70 328 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 CMTM3Q96MX0 182 aa18.1■□□□□ 0.49
PTCH1-210ENST00000468211 IGHV7-4-1A0A0J9YVY3 117 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 CHEK1O14757 476 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 MT-CO2P00403 227 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 MFAP4P55083 255 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 PRCDQ00LT1 54 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 TNFRSF9Q07011 255 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 SPINK9Q5DT21 86 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 RNASE12Q5GAN4 147 aaKnown RBP18.09■□□□□ 0.49
PTCH1-210ENST00000468211 APRG1Q8IVJ8 170 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 ZNF114Q8NC26 417 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 RHPN1-AS1Q9BWJ2 59 aa18.09■□□□□ 0.49
PTCH1-210ENST00000468211 CXorf65A6NEN9 183 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 UBE2CO00762 179 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 NUPL2O15504 423 aaKnown RBP18.08■□□□□ 0.48
PTCH1-210ENST00000468211 S100GP29377 79 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 FCGR2BP31994 310 aaPredicted RBP18.08■□□□□ 0.48
PTCH1-210ENST00000468211 BMI1P35226 326 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 RNF183Q96D59 192 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 OR10C1Q96KK4 312 aa18.08■□□□□ 0.48
PTCH1-210ENST00000468211 NXF2Q9GZY0 626 aaKnown RBP18.08■□□□□ 0.48
PTCH1-210ENST00000468211 IGHV3OR16-13A0A075B7E8 117 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 IGHV3-74A0A0B4J1X5 117 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 KIR2DL5BA0A0G2JN68 375 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 KIR2DL5BA0A0G2JPC4 375 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 YIF1AO95070 293 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 PI3P19957 117 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 HSPE1P61604 102 aaKnown RBP18.07■□□□□ 0.48
PTCH1-210ENST00000468211 RELQ04864 619 aaPredicted RBP18.07■□□□□ 0.48
PTCH1-210ENST00000468211 KIR2DL5AQ8N109 375 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 STPG3Q8N7X2 389 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 TMEM116Q8NCL8 245 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 KIR2DL5BQ8NHK3 375 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 LINC00476Q8WZB0 136 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 MAP6D1Q9H9H5 199 aa18.07■□□□□ 0.48
PTCH1-210ENST00000468211 IGKV1-5P01602 117 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms