RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 A0A087WUU8 490 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 IGKV1-6A0A0C4DH72 117 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 LOC102725191A0A1B0GVB3 256 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 A0A1W2PP18 115 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 DHRS12A0PJE2 317 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 IRGMA1A4Y4 181 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 TLCD2A6NGC4 264 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 LEUTXA8MZ59 168 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 F6UZH7 168 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 H0YJW9 148 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 M0R143 59 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ZNF861PO60384 105 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 IGF2P01344 180 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HLA-DQA1P01909 254 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 LINC00869P0C866 280 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 PTHLHP12272 177 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ZNF32P17041 273 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 IL1RNP18510 177 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BOP23527 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BBP33778 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 EVX1P49640 407 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BDP58876 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 FGF12P61328 243 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BCP62807 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 EIF3IQ13347 325 aaKnown RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST2H2BEQ16778 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 RNASE13Q5GAN3 156 aaKnown RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 BCL2L15Q5TBC7 163 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 SLC25A34Q6PIV7 304 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 UNQ9165/PRO28630Q6UXU0 137 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ZNF695Q8IW36 515 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 H1FOOQ8IZA3 346 aaPredicted RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 RNF175Q8N4F7 328 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ZNF433Q8N7K0 673 aaPredicted RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR4E2Q8NGC2 313 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR4C16Q8NGL9 310 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR4K13Q8NH42 304 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR5W2Q8NH69 310 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR4A5Q8NH83 315 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 SGMS2Q8NHU3 365 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 RPS4Y2Q8TD47 263 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BHQ93079 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ELSPBP1Q96BH3 223 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 BORCS8Q96FH0 119 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BNQ99877 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 HIST1H2BMQ99879 126 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 PRADC1Q9BSG0 188 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 LINC00470Q9BZP3 86 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 OR8D2Q9GZM6 311 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 LPAR5Q9H1C0 372 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 TCEAL2Q9H3H9 227 aaPredicted RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 TUBA4BQ9H853 241 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 ZNF286AQ9HBT8 521 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 MRPL16Q9NX20 251 aaKnown RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 NAT8BQ9UHF3 227 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 CHD2O14647 1828 aaKnown RBP2.46□□□□□ -2.02
VPS50-209ENST00000467326 KIF1BO60333 1816 aa2.46□□□□□ -2.02
VPS50-209ENST00000467326 NEO1Q92859 1461 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 FGD6Q6ZV73 1430 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 FABP5P3A8MUU1 101 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 C9JCJ5 164 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 I3L521 148 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 PLA2G10O15496 165 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 RBFOX2O43251 390 aaKnown RBP eCLIP2.45□□□□□ -2.02
VPS50-209ENST00000467326 TRGC2P03986 189 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 NFYBP25208 207 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 YPEL3P61236 119 aaPredicted RBP2.45□□□□□ -2.02
VPS50-209ENST00000467326 PSG7Q13046 419 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 OR8G1Q15617 311 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 DEFB128Q7Z7B8 93 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 MMGT1Q8N4V1 131 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 PPTC7Q8NI37 304 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 LMX1AQ8TE12 382 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 H1FXQ92522 213 aaKnown RBP2.45□□□□□ -2.02
VPS50-209ENST00000467326 TMEM106AQ96A25 262 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 SLAMF6Q96DU3 332 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 PEBP4Q96S96 227 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 NDFIP1Q9BT67 221 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 SHANK2-AS3Q9BTD1 123 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 SPANXDQ9BXN6 97 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 AICDAQ9GZX7 198 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 Q9H521 79 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 SCP2D1Q9UJQ7 156 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 ZFP30Q9Y2G7 519 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 KDM5BQ9UGL1 1544 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 ITGB4P16144 1822 aa2.45□□□□□ -2.02
VPS50-209ENST00000467326 ZNF609O15014 1411 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 NAIPQ13075 1403 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 YEATS2Q9ULM3 1422 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 IGHV3-21A0A0B4J1V1 117 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 IGHV3-43A0A0B4J1X8 118 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 PNMA8CA0A1B0GUJ8 204 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 PINLYPA6NC86 204 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 IZUMO1RA6ND01 250 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 ARRDC5A6NEK1 342 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 GABARAPH6UMI1 98 aa2.44□□□□□ -2.02
VPS50-209ENST00000467326 PANO1I0J062 215 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms