RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SMCO1Q147U7 214 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 KLK9Q2XQG4 91 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 PLET1Q6UQ28 207 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 FAM223AQ8IWN6 122 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 NECAP1Q8NC96 275 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 OR52E5Q8NH55 327 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 MITD1Q8WV92 249 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 FANCD2OSQ96PS1 177 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 SEC22CQ9BRL7 303 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 KLK9Q9UKQ9 250 aa11.21□□□□□ -0.61
DNMT3A-208ENST00000466601 CCL24O00175 119 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 PF4P02776 101 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 MYCNOSP40205 109 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 ATP5G2Q06055 141 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 GGNBP1Q5YKI7 109 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 OR2C3Q8N628 320 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 ZNF431Q8TF32 576 aaPredicted RBP11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 RAX2Q96IS3 184 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 DUX3Q96PT4 197 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 ENY2Q9NPA8 101 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 CACFD1Q9UGQ2 172 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 FBXL7Q9UJT9 491 aa11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
DNMT3A-208ENST00000466601 IGLV11-55A0A075B6I3 123 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 CYB5BO43169 146 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 ADAP1O75689 374 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 NXPH3O95157 252 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 NDUFB8O95169 186 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 IFNA21P01568 189 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 IL5P05113 134 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 SLC25A6P12236 298 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 HOXA1P49639 335 aaPredicted RBP11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 PDLIM3Q53GG5 364 aaPredicted RBP11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 OR11H1Q8NG94 326 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 OR1S1Q8NH92 325 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 P2RX4Q99571 388 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
DNMT3A-208ENST00000466601 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 INMT-MINDY4F8WBC2 141 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 PITX3O75364 302 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 OR1N2Q8NGR9 330 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 MARVELD1Q9BSK0 173 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 THYN1Q9P016 225 aa11.18□□□□□ -0.62
DNMT3A-208ENST00000466601 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 SPNP16150 400 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 SNCAP37840 140 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 MFAP2P55001 183 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 TNFRSF9Q07011 255 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 EXOSC2Q13868 293 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 C12orf45Q8N5I9 185 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 UXS1Q8NBZ7 420 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 ZNF114Q8NC26 417 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 DPF1Q92782 380 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 GPN1Q9HCN4 374 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 HSPB7Q9UBY9 170 aa11.17□□□□□ -0.62
DNMT3A-208ENST00000466601 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 A0A087WW49 117 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 ANKRD34BA5PLL1 514 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 MPTX1A8MV57 137 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 PRAF2O60831 178 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 PTTG1O95997 202 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 DCTN2Q13561 401 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 FHL3Q13643 280 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 EEF1AKMT3Q96AZ1 226 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 RBKSQ9H477 322 aa11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 RANGRFQ9HD47 186 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 PEF1Q9UBV8 284 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-208ENST00000466601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 FAM90A26D6RGX4 464 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 LINC01619G3V211 115 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 IGHV3-23P01764 117 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 OR8U8P0C7N1 319 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 S4R3C0 116 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 TRRAPQ9Y4A5 3859 aa11.15□□□□□ -0.62
DNMT3A-208ENST00000466601 MFSD2BA6NFX1 497 aa11.14□□□□□ -0.63
DNMT3A-208ENST00000466601 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
DNMT3A-208ENST00000466601 CCSO14618 274 aa11.14□□□□□ -0.63
DNMT3A-208ENST00000466601 MED6O75586 246 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms