RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 IGF2RP11717 2491 aa13.36□□□□□ -0.27
SLX4-202ENST00000466154 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
SLX4-202ENST00000466154 KRTCAP3Q53RY4 240 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 OCC1Q8TAD7 63 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 PRNDQ9UKY0 176 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 TRAPPC1Q9Y5R8 145 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 ATRXP46100 2492 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 TEX50A0A1B0GTY4 177 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 PHOX2AO14813 284 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 IGHV2-70P01814 119 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 IL3RAP26951 378 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 OR1P1Q8NH06 330 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 OR2T6Q8NHC8 308 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 SFRP2Q96HF1 295 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 COL6A6A6NMZ7 2263 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 LYNX1G3V0Z9 82 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 APOA2P02652 100 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 LYNX1P0DP58 116 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 G0S2P27469 103 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 PMS2P11Q13670 270 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 ADTRPQ96IZ2 230 aa13.35□□□□□ -0.27
SLX4-202ENST00000466154 PPIAL4EA0A075B759 164 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 PPIAL4FP0DN26 164 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 SLC35B1P78383 322 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 SSX2Q16385 188 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 ZNF439Q8NDP4 499 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 PRSS33Q8NF86 280 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 FAM222BQ8WU58 562 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 NABP2Q9BQ15 211 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 GAL3ST2Q9H3Q3 398 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 PPIAL4AQ9Y536 164 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 UPK2O00526 184 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 TMEM200BQ69YZ2 307 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 SLC25A48Q6ZT89 311 aaKnown RBP13.34□□□□□ -0.27
SLX4-202ENST00000466154 DIRC2Q96SL1 478 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 CSMD1Q96PZ7 3565 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 TRGV8A0A0C4DH27 118 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 DVL1O14640 695 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 CRYBB3P26998 211 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 ZNF90Q03938 601 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 HLA-DRB5Q30154 266 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
SLX4-202ENST00000466154 IMMP2LQ96T52 175 aa13.34□□□□□ -0.27
SLX4-202ENST00000466154 IGKV1OR2-108A0A075B7D4 117 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 E7EUB6 86 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 PLAUP00749 431 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 TMEM183AQ8IXX5 376 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
SLX4-202ENST00000466154 MED13LQ71F56 2210 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 GRIFINA4D1Z8 144 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 TGOLN2O43493 480 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 NDUFB3O43676 98 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 GATCO43716 136 aaKnown RBP13.33□□□□□ -0.28
SLX4-202ENST00000466154 VENTXO95231 258 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 NHLRC2Q8NBF2 726 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 TANC2Q9HCD6 1990 aa13.33□□□□□ -0.28
SLX4-202ENST00000466154 AMBPP02760 352 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 THBDP07204 575 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 NUBP1P53384 320 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 ERVFC1-1P60608 527 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.32□□□□□ -0.28
SLX4-202ENST00000466154 RAB1CQ92928 201 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
SLX4-202ENST00000466154 LINC00312Q9Y6C7 94 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 DSCAML1Q8TD84 2053 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 MT-CO2P00403 227 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 FAM87AP0C7U9 286 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 MGST1P10620 155 aaKnown RBP13.32□□□□□ -0.28
SLX4-202ENST00000466154 TCL1AP56279 114 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 OR10G8Q8NGN5 311 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 SUMO1P63165 101 aaKnown RBP13.32□□□□□ -0.28
SLX4-202ENST00000466154 PRCDQ00LT1 54 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 FXYD3Q14802 87 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 UHRF2Q96PU4 802 aa13.32□□□□□ -0.28
SLX4-202ENST00000466154 PTPRQQ9UMZ3 2332 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 SLC25A17O43808 307 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 RBM14Q96PK6 669 aaKnown RBP13.31□□□□□ -0.28
SLX4-202ENST00000466154 SERTAD4Q9NUC0 356 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 CBLN1P23435 193 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 SRP14P37108 136 aaKnown RBP13.31□□□□□ -0.28
SLX4-202ENST00000466154 RPL8P62917 257 aaKnown RBP13.31□□□□□ -0.28
SLX4-202ENST00000466154 SSBP2P81877 361 aaPredicted RBP13.31□□□□□ -0.28
SLX4-202ENST00000466154 AARDQ4LEZ3 155 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 LRRC10Q5BKY1 277 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 HCP5Q6MZN7 132 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
SLX4-202ENST00000466154 FCN3O75636 299 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 IGF2-ASQ6U949 168 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
SLX4-202ENST00000466154 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 SSTP61278 116 aa13.3□□□□□ -0.28
SLX4-202ENST00000466154 ERHP84090 104 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms