RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PEF1Q9UBV8 284 aaKnown RBP8.97□□□□□ -0.97
CUX1-207ENST00000465461 TMEM56-RWDD3S4R434 201 aa8.97□□□□□ -0.97
CUX1-207ENST00000465461 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.97
CUX1-207ENST00000465461 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.97
CUX1-207ENST00000465461 MFSD2BA6NFX1 497 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 CENPXA8MT69 81 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 LYRM1O43325 122 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 SFT2D2O95562 160 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 IFNA17P01571 189 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 HLA-AP01891 365 aaKnown RBP8.96□□□□□ -0.98
CUX1-207ENST00000465461 ANXA7P20073 488 aaKnown RBP8.96□□□□□ -0.98
CUX1-207ENST00000465461 PRCDQ00LT1 54 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 TMEM128Q5BJH2 165 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 CLEC19AQ6UXS0 136 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 SRSF8Q9BRL6 282 aaKnown RBP8.96□□□□□ -0.98
CUX1-207ENST00000465461 CCDC32Q9BV29 185 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 RANGRFQ9HD47 186 aaPredicted RBP8.96□□□□□ -0.98
CUX1-207ENST00000465461 CACNG5Q9UF02 275 aa8.96□□□□□ -0.98
CUX1-207ENST00000465461 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.95□□□□□ -0.98
CUX1-207ENST00000465461 SEC14L6B5MCN3 397 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 OVOL1O14753 267 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 DHFRP00374 187 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 ANXA3P12429 323 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 KRTAP10-11P60412 298 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 IFITM3Q01628 133 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 ZNF846Q147U1 533 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 THOC7Q6I9Y2 204 aaKnown RBP8.95□□□□□ -0.98
CUX1-207ENST00000465461 LINC00299Q6ZSB3 139 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 ZNF429Q86V71 674 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 LGI3Q8N145 548 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 C7orf50Q9BRJ6 194 aaKnown RBP8.95□□□□□ -0.98
CUX1-207ENST00000465461 PDCD10Q9BUL8 212 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 PLEKHA3Q9HB20 300 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
CUX1-207ENST00000465461 F11RQ9Y624 299 aaKnown RBP8.95□□□□□ -0.98
CUX1-207ENST00000465461 TRAV6A0A075B6T7 132 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 C9orf170A2RU37 121 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 BMPR1BO00238 502 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 IGHV3-48P01763 117 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 HIST1H1BP16401 226 aaKnown RBP8.94□□□□□ -0.98
CUX1-207ENST00000465461 HOXA1P49639 335 aaPredicted RBP8.94□□□□□ -0.98
CUX1-207ENST00000465461 SYNJ2BPP57105 145 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 KLK9Q2XQG4 91 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 HSD17B13Q7Z5P4 300 aaPredicted RBP8.94□□□□□ -0.98
CUX1-207ENST00000465461 HAPLN4Q86UW8 402 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 FAM219AQ8IW50 185 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 OR52B4Q8NGK2 314 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 IL22RA2Q969J5 263 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 EEF1AKMT3Q96AZ1 226 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 MISP3Q96FF7 219 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
CUX1-207ENST00000465461 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.94□□□□□ -0.98
CUX1-207ENST00000465461 KLK9Q9UKQ9 250 aa8.94□□□□□ -0.98
CUX1-207ENST00000465461 NOTCH3Q9UM47 2321 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 A0A0B4J2A0 478 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 UPK1BO75841 260 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 OR2C1O95371 312 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 TCRBP04435 133 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 CLEC3BP05452 202 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 HOXB5P09067 269 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 OR4E1P0C645 316 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 UBE2MP61081 183 aaKnown RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 ERHP84090 104 aaKnown RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 KLF5Q13887 457 aaPredicted RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 RPEL1Q2QD12 228 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 NMSQ5H8A3 153 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 KPRPQ5T749 579 aaPredicted RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 PINX1Q96BK5 328 aaKnown RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 MCRIP2Q9BUT9 160 aaKnown RBP8.93□□□□□ -0.98
CUX1-207ENST00000465461 C20orf85Q9H1P6 137 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 SHPKQ9UHJ6 478 aa8.93□□□□□ -0.98
CUX1-207ENST00000465461 IGHV3-35A0A0C4DH35 117 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 K7EIM0 57 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 SAP30O75446 220 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 ADAP1O75689 374 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 DUS4LO95620 317 aaKnown RBP8.92□□□□□ -0.98
CUX1-207ENST00000465461 SULT1A3P0DMM9 295 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 SULT1A4P0DMN0 295 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 EDN2P20800 178 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 ZP3P21754 424 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 GPR183P32249 361 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 ARL3P36405 182 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 DHRS2Q13268 280 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 MLANAQ16655 118 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 C4orf46Q504U0 113 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 C9orf66Q5T8R8 295 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 UBAC2Q8NBM4 344 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 ZNF502Q8TBZ5 544 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 SCARB1Q8WTV0 552 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 ENY2Q9NPA8 101 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 AURKAIP1Q9NWT8 199 aaPredicted RBP8.92□□□□□ -0.98
CUX1-207ENST00000465461 SELENOKQ9Y6D0 94 aa8.92□□□□□ -0.98
CUX1-207ENST00000465461 OR2T8A6NH00 312 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 CEBPZOSA8MTT3 80 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 MPTX1A8MV57 137 aa8.91□□□□□ -0.98
CUX1-207ENST00000465461 RNASE2P10153 161 aaKnown RBP8.91□□□□□ -0.98
CUX1-207ENST00000465461 SPCS3P61009 180 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms