RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ANXA7P20073 488 aaKnown RBP13.15□□□□□ -0.3
USP39-211ENST00000465282 SPCS3P61009 180 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
USP39-211ENST00000465282 RHOGP84095 191 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 WT1-ASQ06250 92 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 Q6ZRM9 215 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 PLEKHA3Q9HB20 300 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 CACNG5Q9UF02 275 aa13.15□□□□□ -0.3
USP39-211ENST00000465282 TRAV6A0A075B6T7 132 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 SMCO1Q147U7 214 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 C18orf65Q6ZTR6 163 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 P2RX4Q99571 388 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 PRR13Q9NZ81 148 aa13.14□□□□□ -0.31
USP39-211ENST00000465282 IGLV11-55A0A075B6I3 123 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 REG1AP05451 166 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 ZNF114Q8NC26 417 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 OR1P1Q8NH06 330 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 RAX2Q96IS3 184 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 PALMDQ9NP74 551 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
USP39-211ENST00000465282 F11RQ9Y624 299 aaKnown RBP13.13□□□□□ -0.31
USP39-211ENST00000465282 IFNA21P01568 189 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 PRH1P02810 166 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 HSPB1P04792 205 aaKnown RBP13.12□□□□□ -0.31
USP39-211ENST00000465282 OR8U8P0C7N1 319 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 ZNF616Q08AN1 781 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 FHL3Q13643 280 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 PLET1Q6UQ28 207 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 NRARPQ7Z6K4 114 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 OR11H1Q8NG94 326 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 OR1N2Q8NGR9 330 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 DPF1Q92782 380 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
USP39-211ENST00000465282 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
USP39-211ENST00000465282 FAM90A26D6RGX4 464 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 OR2J3O76001 311 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 IL5P05113 134 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 SNCAP37840 140 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 SUB1P53999 127 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP39-211ENST00000465282 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 ETV3LQ6ZN32 361 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
USP39-211ENST00000465282 MGAM2Q2M2H8 2515 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 PITX3O75364 302 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 HOXB5P09067 269 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 HOXA1P49639 335 aaPredicted RBP13.1□□□□□ -0.31
USP39-211ENST00000465282 TNFRSF9Q07011 255 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 GGNBP1Q5YKI7 109 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 LINC00482Q8N8I6 264 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 OR1S1Q8NH92 325 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
USP39-211ENST00000465282 OR5B12Q96R08 314 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 ATP6V0BQ99437 205 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 MARVELD1Q9BSK0 173 aa13.1□□□□□ -0.31
USP39-211ENST00000465282 PEF1Q9UBV8 284 aaKnown RBP13.1□□□□□ -0.31
USP39-211ENST00000465282 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 LINC01619G3V211 115 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 PRAF2O60831 178 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 CD33P20138 364 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 ZP3P21754 424 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 HTR2BP41595 481 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 HIPK2Q9H2X6 1198 aa13.09□□□□□ -0.31
USP39-211ENST00000465282 GPN1Q9HCN4 374 aaPredicted RBP13.09□□□□□ -0.31
USP39-211ENST00000465282 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 CEBPZOSA8MTT3 80 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 CORTO00230 105 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 MED6O75586 246 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 NDUFB8O95169 186 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 LY86O95711 162 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 PTTG1O95997 202 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 ATP5IP56385 69 aaPredicted RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 EXOSC2Q13868 293 aaKnown RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 C19orf35Q6ZS72 473 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 NOXA1Q86UR1 476 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 OR52B4Q8NGK2 314 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 RCC1LQ96I51 464 aaKnown RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 MCRIP2Q9BUT9 160 aaKnown RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 HEYLQ9NQ87 328 aaPredicted RBP13.08□□□□□ -0.32
USP39-211ENST00000465282 DMRT1Q9Y5R6 373 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
USP39-211ENST00000465282 SNRPGP15A8MWD9 76 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 BSXQ3C1V8 233 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 SPINK9Q5DT21 86 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
USP39-211ENST00000465282 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
USP39-211ENST00000465282 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms