RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 WRBO00258 174 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 IGHG4P01861 327 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-209ENST00000465132 RPP30P78346 268 aaKnown RBP13.63□□□□□ -0.23
CPSF4-209ENST00000465132 NDPQ00604 133 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 IAH1Q2TAA2 248 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-209ENST00000465132 ZNF355PQ9NSJ1 428 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 HSPB7Q9UBY9 170 aa13.63□□□□□ -0.23
CPSF4-209ENST00000465132 A0A0G2JLM5 398 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 ADAP1O75689 374 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 OR13C7P0DN81 318 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 EGR2P11161 476 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-209ENST00000465132 PSMB6P28072 239 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 SSBP2P81877 361 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-209ENST00000465132 TNFRSF9Q07011 255 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 TCTEX1D4Q5JR98 221 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 C2orf50Q96LR7 162 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 MED28Q9H204 178 aa13.62□□□□□ -0.23
CPSF4-209ENST00000465132 HEYLQ9NQ87 328 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-209ENST00000465132 TEX22C9J3V5 150 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 G3V318 75 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 CRYGCP07315 174 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 PF4V1P10720 104 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 PPIFP30405 207 aaKnown RBP13.61□□□□□ -0.23
CPSF4-209ENST00000465132 IZUMO4Q1ZYL8 232 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 C10orf55Q5SWW7 151 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 Q6ZRM9 215 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 ASB13Q8WXK3 278 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 FBXO7Q9Y3I1 522 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 ALG5Q9Y673 324 aa13.61□□□□□ -0.23
CPSF4-209ENST00000465132 CORTO00230 105 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 PITX3O75364 302 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 IGLV1-40P01703 118 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 HTR2BP41595 481 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-209ENST00000465132 CFHR3Q02985 330 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 C19orf54Q5BKX5 351 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 ZBTB8BQ8NAP8 495 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-209ENST00000465132 OR5T1Q8NG75 326 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 USMG5Q96IX5 58 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 GSKIPQ9P0R6 139 aa13.6□□□□□ -0.23
CPSF4-209ENST00000465132 TSSC4Q9Y5U2 329 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-209ENST00000465132 TCRBV4S1A1TA0A5B7 111 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 HMX3A6NHT5 357 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 FAM223BA6NKX1 122 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 K7EIL1 84 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 GOSR2O14653 212 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 CTRB1P17538 263 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 PVALBP20472 110 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-209ENST00000465132 CTRB2Q6GPI1 263 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 ZNF329Q86UD4 541 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 FAM223AQ8IWN6 122 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 ZNF114Q8NC26 417 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 NECAP1Q8NC96 275 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 OR1P1Q8NH06 330 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 DTD1Q8TEA8 209 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 U3KQ87 197 aa13.59□□□□□ -0.23
CPSF4-209ENST00000465132 SYNGR2O43760 224 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 SCAF4O95104 1147 aaKnown RBP13.58□□□□□ -0.24
CPSF4-209ENST00000465132 PF4P02776 101 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 TRGV3P03979 118 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 RLN2P04090 185 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 PET100P0DJ07 73 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 PSMB8P28062 276 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 RAB9AP51151 201 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 RCC1LQ96I51 464 aaKnown RBP13.58□□□□□ -0.24
CPSF4-209ENST00000465132 NMES1Q9C002 83 aa13.58□□□□□ -0.24
CPSF4-209ENST00000465132 E7EUB6 86 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 APELAP0DMC3 54 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 MYOD1P15172 320 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 AREGP15514 252 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 TPPP2P59282 170 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 ID3Q02535 119 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 WT1-ASQ06250 92 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 ASPHD1Q5U4P2 390 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 OR10W1Q8NGF6 305 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 OR10C1Q96KK4 312 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 CXorf58Q96LI9 332 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 RAB40CQ96S21 281 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 RBKSQ9H477 322 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 MGAT4CQ9UBM8 478 aa13.57□□□□□ -0.24
CPSF4-209ENST00000465132 F11RQ9Y624 299 aaKnown RBP13.57□□□□□ -0.24
CPSF4-209ENST00000465132 CGB1A6NKQ9 187 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 CCSO14618 274 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 SCGB1D2O95969 90 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 IFNA10P01566 189 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-209ENST00000465132 TAS2R30P59541 319 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 KRTAP10-11P60412 298 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 RAB11AP62491 216 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
CPSF4-209ENST00000465132 SLC25A24Q6NUK1 477 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms