RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ATP5G2Q06055 141 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 C15orf32Q32M92 178 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 OR2C3Q8N628 320 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 OR11H1Q8NG94 326 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 DPF1Q92782 380 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 C20orf85Q9H1P6 137 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 NSG2Q9Y328 171 aa10.6□□□□□ -0.71
LIMD1-203ENST00000465039 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 HLA-AP01891 365 aaKnown RBP10.59□□□□□ -0.71
LIMD1-203ENST00000465039 TCRBP04435 133 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 APELAP0DMC3 54 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 MYOD1P15172 320 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 ERHP84090 104 aaKnown RBP10.59□□□□□ -0.71
LIMD1-203ENST00000465039 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
LIMD1-203ENST00000465039 HIST2H2BDQ6DRA6 164 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 C18orf65Q6ZTR6 163 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 VN1R17PQ8TDU5 208 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 ZMAT5Q9UDW3 170 aaKnown RBP10.59□□□□□ -0.71
LIMD1-203ENST00000465039 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 TBC1D24Q9ULP9 559 aa10.59□□□□□ -0.71
LIMD1-203ENST00000465039 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
LIMD1-203ENST00000465039 A0A0G2JRQ6 117 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 LINC00854A0A1B0GVQ3 168 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 FAM90A26D6RGX4 464 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 CORTO00230 105 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 LY86O95711 162 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 IFNA17P01571 189 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 OR4E1P0C645 316 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 INSL3P51460 131 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 ATP5IP56385 69 aaPredicted RBP10.58□□□□□ -0.72
LIMD1-203ENST00000465039 DEFA1P59665 94 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 DEFA3P59666 94 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 DHRS2Q13268 280 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
LIMD1-203ENST00000465039 SMCO1Q147U7 214 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 SAMD5Q5TGI4 173 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 LYG2Q86SG7 212 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 OR10W1Q8NGF6 305 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 COQ8AQ8NI60 647 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 HINT2Q9BX68 163 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 GAR1Q9NY12 217 aaKnown RBP10.58□□□□□ -0.72
LIMD1-203ENST00000465039 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
LIMD1-203ENST00000465039 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
LIMD1-203ENST00000465039 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 OR2J3O76001 311 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
LIMD1-203ENST00000465039 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 ANKRD55Q3KP44 614 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 C4orf46Q504U0 113 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 Q6ZRM9 215 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 GPR146Q96CH1 333 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 NUDT15Q9NV35 164 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 HSPB7Q9UBY9 170 aa10.57□□□□□ -0.72
LIMD1-203ENST00000465039 IGHV3-11P01762 117 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 PRH1P02810 166 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 FCGR2BP31994 310 aaPredicted RBP10.56□□□□□ -0.72
LIMD1-203ENST00000465039 SNCAP37840 140 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 LYZL2Q7Z4W2 148 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 NOXA1Q86UR1 476 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 DUSP18Q8NEJ0 188 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 MITD1Q8WV92 249 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 OR5B12Q96R08 314 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 PALMDQ9NP74 551 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
LIMD1-203ENST00000465039 MEGF8Q7Z7M0 2845 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 A0A087WW49 117 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 PITX3O75364 302 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 REG1AP05451 166 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 ANXA7P20073 488 aaKnown RBP10.55□□□□□ -0.72
LIMD1-203ENST00000465039 HOXD3P31249 432 aaPredicted RBP10.55□□□□□ -0.72
LIMD1-203ENST00000465039 HTR2BP41595 481 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
LIMD1-203ENST00000465039 TNFRSF9Q07011 255 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 TATDN3Q17R31 274 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 SPSB3Q6PJ21 355 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 ENKURQ8TC29 256 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 TXN2Q99757 166 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
LIMD1-203ENST00000465039 OVOL1O14753 267 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 NDUFB8O95169 186 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 IFNA21P01568 189 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 H2AFB2P0C5Z0 115 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 KLF5Q13887 457 aaPredicted RBP10.54□□□□□ -0.72
LIMD1-203ENST00000465039 RPEL1Q2QD12 228 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 C9orf66Q5T8R8 295 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 BSCL2Q96G97 398 aaPredicted RBP10.54□□□□□ -0.72
LIMD1-203ENST00000465039 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
LIMD1-203ENST00000465039 DUX3Q96PT4 197 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms