RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 SP1P08047 785 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A6P0DMU7 189 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A5P0DMU8 189 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A7P0DMV0 189 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CKS1BP61024 79 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ERHP84090 104 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF146Q15072 292 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 TRIP6Q15654 476 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 TBC1D28Q2M2D7 210 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A1Q5HYN5 189 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 Q5PR19 223 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 MIR17HGQ75NE6 70 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 YRDCQ86U90 279 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 C17orf82Q86X59 251 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SPEM1Q8N4L4 309 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RBMXL3Q8N7X1 1067 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT45A3Q8NHU0 189 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 VWCEQ96DN2 955 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF48Q96MX3 618 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SCRT2Q9NQ03 307 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RNF114Q9Y508 228 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CHCHD2Q9Y6H1 151 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 A0A096LPE4 126 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PPZ6 126 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 C12orf77C9JDV5 145 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RRHO14718 337 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SLC25A5P05141 298 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 P0C879 139 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 AZU1P20160 251 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RPL30P62888 115 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 KIR3DS1Q14943 382 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SAMD5Q5TGI4 173 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 Q6P435 159 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF841Q6ZN19 808 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RBPMS2Q6ZRY4 209 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 LHFPL4Q7Z7J7 247 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 DTX1Q86Y01 620 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PDPNQ86YL7 162 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 GPR82Q96P67 336 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 NDFIP1Q9BT67 221 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PAXXQ9BUH6 204 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 VCX2Q9H322 139 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 OBP2BQ9NPH6 170 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PLSCR4Q9NRQ2 329 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 BOKQ9UMX3 212 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PHF3Q92576 2039 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PCNX3Q9H6A9 2034 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 K7EQM0 130 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 PEX7O00628 323 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 GFRA3O60609 400 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV3-9P01782 118 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 GRPP07492 148 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 GDF1P27539 372 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 FOXA3P55318 350 aaPredicted RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CT83Q5H943 113 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF766Q5HY98 468 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 ZADH2Q8N4Q0 377 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 TPRX1Q8N7U7 411 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 CACNG8Q8WXS5 425 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RAB37Q96AX2 223 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SNRNP40Q96DI7 357 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 SRXN1Q9BYN0 137 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 GTSF1LQ9H1H1 148 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 RPP21Q9H633 154 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 TMEM140Q9NV12 185 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 IDI2-AS1Q9NZ38 188 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 LSM4Q9Y4Z0 139 aaKnown RBP3.21□□□□□ -1.9
CCNL1-204ENST00000464316 MYO7BQ6PIF6 2116 aa3.21□□□□□ -1.9
CCNL1-204ENST00000464316 A0A1W2PPM0 123 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 GAGE12HA6NDE8 117 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 ZNF716A6NP11 495 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 F8W1H4 67 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 IGLV2-14P01704 120 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 IGLV3-19P01714 112 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 MYF5P13349 255 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 COL8A1P27658 744 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 C10orf113Q5VZT2 155 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 NEGR1Q7Z3B1 354 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 SPATA12Q7Z6I5 190 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 WFDC8Q8IUA0 241 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 HS3ST6Q96QI5 342 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CFHR5Q9BXR6 569 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 NPFFR1Q9GZQ6 430 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 RALGAPA1Q6GYQ0 2036 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PPIAL4CA0A0B4J2A2 164 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 IGHV1-24A0A0C4DH33 117 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 FOXH1O75593 365 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CSN3P07498 182 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 FRMD6-AS1P0C7T7 363 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 FAM87AP0C7U9 286 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PPIAL4GP0DN37 164 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CCL3P10147 92 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 CCL2P13500 99 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 IGFBP2P18065 325 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 VDAC2P45880 294 aaPredicted RBP3.2□□□□□ -1.9
CCNL1-204ENST00000464316 FOXL2P58012 376 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 ERVK11-1P61568 191 aa3.2□□□□□ -1.9
CCNL1-204ENST00000464316 PRR20EP86478 221 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms