RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PKD1L2Q7Z442 2459 aa17.61■□□□□ 0.41
PDLIM2-216ENST00000464275 C19orf84I3L1E1 186 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 IGKV1D-33P01593 117 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 IGKV1-33P01594 117 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 USF1P22415 310 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 CD81P60033 236 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 TMEM241Q24JQ0 296 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 FFAR4Q5NUL3 377 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 UBTD1Q9HAC8 227 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 SMCO3A2RU48 225 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 S100A2P29034 98 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 HNF4GQ14541 408 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 ACOT6Q3I5F7 207 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 TMEM167AQ8TBQ9 72 aa17.6■□□□□ 0.41
PDLIM2-216ENST00000464275 CA2P00918 260 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 ATP5IP56385 69 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 GSN-AS1Q9NRJ2 163 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BKO60814 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BJP06899 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 IGFBP2P18065 325 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BOP23527 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BBP33778 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BDP58876 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BCP62807 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 RPL8P62917 257 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST2H2BEQ16778 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 TREML4Q6UXN2 200 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BHQ93079 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BNQ99877 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 HIST1H2BMQ99879 126 aa17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 GAR1Q9NY12 217 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 AMMECR1Q9Y4X0 333 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-216ENST00000464275 C22orf46C9J442 243 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 BUB1B-PAK6H3BSN5 160 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 IGLV2-23P01705 113 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 NDUFA6P56556 154 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 COMMD5Q9GZQ3 224 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 NPVFQ9HCQ7 196 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 ONECUT1Q9UBC0 465 aa17.58■□□□□ 0.4
PDLIM2-216ENST00000464275 A6NNC1 897 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 CDKN1AP38936 164 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 LGALS7P47929 136 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 VMA21Q3ZAQ7 101 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 DNLZQ5SXM8 178 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 Q8N7P7 452 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 OR1L8Q8NGR8 309 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 SSBP3Q9BWW4 388 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 SLC25A22Q9H936 323 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 PPP1R2P9O14990 202 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 VENTXO95231 258 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 GPR6P46095 362 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 BSXQ3C1V8 233 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 NDUFA4L2Q9NRX3 87 aa17.57■□□□□ 0.4
PDLIM2-216ENST00000464275 FNDC10F2Z333 226 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 TRGC2P03986 189 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 COX7A1P24310 79 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 DLX1P56177 255 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 RAB24Q969Q5 203 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 PYGO2Q9BRQ0 406 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 ARHGAP32A7KAX9 2087 aa17.56■□□□□ 0.4
PDLIM2-216ENST00000464275 INS-IGF2F8WCM5 200 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 OPRK1P41145 380 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 C2orf83Q53S99 150 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 ANAPC16Q96DE5 110 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 TXNDC17Q9BRA2 123 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 KCNIP2Q9NS61 270 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 RELNP78509 3460 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 HRNRQ86YZ3 2850 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 LOC105371242A0A075B767 164 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 M0R1W7 72 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 ENSAO43768 121 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 CDC34P49427 236 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 PNKDQ8N490 385 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 OR4P4Q8NGL7 312 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 SRD5A3Q9H8P0 318 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 INSIG2Q9Y5U4 225 aa17.55■□□□□ 0.4
PDLIM2-216ENST00000464275 IGHV1-3A0A0C4DH29 117 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 A0A1W2PN81 502 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 YIF1AO95070 293 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 CHRNA7P36544 502 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 ADIRFQ15847 76 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 MGST2Q99735 147 aa17.54■□□□□ 0.4
PDLIM2-216ENST00000464275 EFNA4P52798 201 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 ERHP84090 104 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 ARSJQ5FYB0 599 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 OR5B12Q96R08 314 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 PARLQ9H300 379 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 LSM4Q9Y4Z0 139 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 PDE6DO43924 150 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 RNASE2P10153 161 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 RPL23P62829 140 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 PRB3Q04118 309 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 MOB3BQ86TA1 216 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 TEX45Q8NA69 505 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 RPEQ96AT9 228 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 GGTLC1Q9BX51 225 aa17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 ZNF430Q9H8G1 570 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-216ENST00000464275 IGHV3-72A0A0B4J1Y9 119 aa17.52■□□□□ 0.4
PDLIM2-216ENST00000464275 LY6LH3BQJ8 138 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms