RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 NUDCD2Q8WVJ2 157 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 DGCR14Q96DF8 476 aaKnown RBP10.5□□□□□ -0.73
SMC1A-204ENST00000463684 OR10C1Q96KK4 312 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 PLEKHA2Q9HB19 425 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 DNAH17Q9UFH2 4485 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 DYNC1H1Q14204 4646 aaKnown RBP10.5□□□□□ -0.73
SMC1A-204ENST00000463684 IGHV3OR16-13A0A075B7E8 117 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 IGHV3-74A0A0B4J1X5 117 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 K7EIM0 57 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 RAB3BP20337 219 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 MYL9P24844 172 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 FCGR2CP31995 323 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 ARPC4P59998 168 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 ERVK-16P61578 105 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
SMC1A-204ENST00000463684 LGALS9BQ3B8N2 356 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 OR13F1Q8NGS4 319 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
SMC1A-204ENST00000463684 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
SMC1A-204ENST00000463684 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 TMEM235A6NFC5 223 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-204ENST00000463684 ST8SIA3O43173 380 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 AMBPP02760 352 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-204ENST00000463684 ZNF773Q6PK81 442 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 DUSP18Q8NEJ0 188 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 GIMAP1Q8WWP7 306 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 MGLLQ99685 303 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 GINS3Q9BRX5 216 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 SLC5A7Q9GZV3 580 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 MS4A6AQ9H2W1 248 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 NDUFA4L2Q9NRX3 87 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 TPRKBQ9Y3C4 175 aa10.48□□□□□ -0.73
SMC1A-204ENST00000463684 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 SCGNO76038 276 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 PPYP01298 95 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 MFAP4P55083 255 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 RCN1Q15293 331 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 SLC25A46Q96AG3 418 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 TXN2Q99757 166 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 COMMD9Q9P000 198 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 MUC4Q99102 2169 aa10.47□□□□□ -0.73
SMC1A-204ENST00000463684 PKD1P98161 4303 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-204ENST00000463684 TRAV2A0A0B4J234 112 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 ZNF705EA8MWA4 302 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-204ENST00000463684 RGS10O43665 173 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 SSX5O60225 188 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 SNAPC5O75971 98 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 IFNA10P01566 189 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 IFNA21P01568 189 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 IFNA17P01571 189 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 SPP1P10451 314 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 NPY1RP25929 384 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 SOHLH1Q5JUK2 328 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 ZNF575Q86XF7 245 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 BEST4Q8NFU0 473 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 NXF2Q9GZY0 626 aaKnown RBP10.46□□□□□ -0.73
SMC1A-204ENST00000463684 OR51B2Q9Y5P1 312 aa10.46□□□□□ -0.73
SMC1A-204ENST00000463684 MARCH11A6NNE9 402 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 GIG44P09565 113 aaPredicted RBP10.45□□□□□ -0.74
SMC1A-204ENST00000463684 FXYD4P59646 89 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 TRPT1Q86TN4 253 aaKnown RBP10.45□□□□□ -0.74
SMC1A-204ENST00000463684 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 ST8SIA2Q92186 375 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 MISP3Q96FF7 219 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 ZNF414Q96IQ9 312 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 VCXQ9H320 206 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 RABAC1Q9UI14 185 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 TBC1D24Q9ULP9 559 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 X6R8D5 127 aa10.45□□□□□ -0.74
SMC1A-204ENST00000463684 GNG7O60262 68 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 PTHLHP12272 177 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 ZNF818PQ6ZRF7 136 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 ZNF767PQ75MW2 155 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 UBE2DNLQ8IWF7 75 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 FAM24BQ8N5W8 94 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 TSPAN14Q8NG11 270 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 BORCS5Q969J3 196 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 DUSP21Q9H596 190 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 TMEM231Q9H6L2 316 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 VSIRQ9H7M9 311 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 TMEM14BQ9NUH8 114 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 FKBP11Q9NYL4 201 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 NSG2Q9Y328 171 aa10.44□□□□□ -0.74
SMC1A-204ENST00000463684 IGLV2-18A0A075B6J9 118 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 I3L2K1 104 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 KRASP01116 189 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 APOHP02749 345 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-204ENST00000463684 OGFRL1Q5TC84 451 aaPredicted RBP10.43□□□□□ -0.74
SMC1A-204ENST00000463684 UBE2UQ5VVX9 321 aa10.43□□□□□ -0.74
SMC1A-204ENST00000463684 TOMM20LQ6UXN7 152 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms