RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CTXN2P0C2S0 81 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 IGLL1P15814 213 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CXCL3P19876 107 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FAUP35544 74 aaKnown RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 F2RL1P55085 397 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 AP3S2P59780 193 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RND3P61587 244 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 LY6EQ16553 131 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TATDN3Q17R31 274 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TRIM16LQ309B1 348 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 C10orf55Q5SWW7 151 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 MZT2BQ6NZ67 158 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 C19orf35Q6ZS72 473 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 KCTD9Q7L273 389 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SSX9Q7RTT3 188 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM219Q86XT9 240 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SLC38A6Q8IZM9 456 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SELENOHQ8IZQ5 122 aaKnown RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 Q8N2B8 174 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 Q8N6K4 173 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR11H7Q8NGC8 314 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR13D1Q8NGV5 346 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR10X1Q8NGY0 326 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR5R1Q8NH85 324 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TCTEX1D2Q8WW35 142 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 NAA60Q9H7X0 242 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 HEXA-AS1Q9H8Q6 139 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 DPM3Q9P2X0 92 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SCP2D1Q9UJQ7 156 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 NSG2Q9Y328 171 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RBM7Q9Y580 266 aaKnown RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 NUBP2Q9Y5Y2 271 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 STAB2Q8WWQ8 2551 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 C3orf85A0A1B0GTC6 90 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1W2PPH5 198 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CENPXA8MT69 81 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 G3V3Q6 166 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FCN1O00602 326 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TOR1AO14656 332 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RAB29O14966 203 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CRYZL1O95825 349 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1D-33P01593 117 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1-33P01594 117 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 HLA-AP01891 365 aaKnown RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FBP1P09467 338 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR9G9P0C7N8 305 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 P0C879 139 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CFC1BP0CG36 223 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CFC1P0CG37 223 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 F2RP25116 425 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 UCP1P25874 307 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 HTR1DP28221 377 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 G6PCP35575 357 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 LPAR6P43657 344 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RAB7AP51149 207 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 DEFA1P59665 94 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 DEFA3P59666 94 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 NDPQ00604 133 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 PJVKQ0ZLH3 352 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CBX3Q13185 183 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FCN2Q15485 313 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SURF2Q15527 256 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM30BQ3MIR4 351 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 Q5BKY6 102 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 LYZL2Q7Z4W2 148 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 LYG2Q86SG7 212 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 MOB3BQ86TA1 216 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 TGIF2LXQ8IUE1 241 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SPAG16Q8N0X2 631 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 KLHDC1Q8N7A1 406 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SLC35G3Q8N808 338 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RPEQ96AT9 228 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF486Q96H40 463 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 OR10C1Q96KK4 312 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 UHRF2Q96PU4 802 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SLC25A21Q9BQT8 299 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 CSTL1Q9H114 145 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RANBP3Q9H6Z4 567 aaPredicted RBP2.8□□□□□ -1.96
SCFD1-204ENST00000463622 PLSCR3Q9NRY6 295 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SLC35D1Q9NTN3 355 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 PIPOXQ9P0Z9 390 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 GAB2Q9UQC2 676 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FAM96BQ9Y3D0 163 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FBXO7Q9Y3I1 522 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 RYR1P21817 5038 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 TEX13DA0A0J9YY54 714 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 A6NDX4 124 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 BTBD17A6NE02 478 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 LEUTXA8MZ59 168 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 H0Y980 276 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 SMLR1H3BR10 107 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 H3BUX3 64 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 DUS4LO95620 317 aaKnown RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 IL5P05113 134 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 CRYGBP07316 175 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 HOXB5P09067 269 aa2.79□□□□□ -1.96
SCFD1-204ENST00000463622 SAA1P0DJI8 122 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-204ENST00000463622 CD28P10747 220 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms