RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ERHP84090 104 aaKnown RBP5.47□□□□□ -1.53
PTPRF-210ENST00000463041 RNASE10Q5GAN6 216 aaKnown RBP5.47□□□□□ -1.53
PTPRF-210ENST00000463041 GPR107Q5VW38 600 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 LAMTOR1Q6IAA8 161 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 UNQ9165/PRO28630Q6UXU0 137 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 RBPMS2Q6ZRY4 209 aaKnown RBP5.47□□□□□ -1.53
PTPRF-210ENST00000463041 TMEM61Q8N0U2 210 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 ARRDC1Q8N5I2 433 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 OR52B4Q8NGK2 314 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 TERB2Q8NHR7 220 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 IL17DQ8TAD2 202 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 ZFAND1Q8TCF1 268 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 SCARB1Q8WTV0 552 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 ISOC1Q96CN7 298 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 TXN2Q99757 166 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 HIPK2Q9H2X6 1198 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 C5orf66Q9H5L9 145 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 PLEKHA3Q9HB20 300 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 C21orf62Q9NYP8 219 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 MTFP1Q9UDX5 166 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 MLXQ9UH92 298 aa5.47□□□□□ -1.53
PTPRF-210ENST00000463041 IGHV3-35A0A0C4DH35 117 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 OR2T8A6NH00 312 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 DBX1A6NMT0 343 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 K7EIM0 57 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 M0QYG6 137 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 SCAF4O95104 1147 aaKnown RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 IGKV1-39P01597 117 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 CD3DP04234 171 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 IGKV1D-39P04432 117 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 CTSGP08311 255 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 SMIM18P0DKX4 95 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 PGAM2P15259 253 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 FCGR2BP31994 310 aaPredicted RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 ALDH3B2P48448 385 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 MFAP2P55001 183 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 MFAP4P55083 255 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 SSBP1Q04837 148 aaKnown RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 LHFPL1Q86WI0 220 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 OR2C3Q8N628 320 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM229BQ8NBD8 167 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 OR52I2Q8NH67 350 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 CACNG8Q8WXS5 425 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 ABHD1Q96SE0 405 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 MRPS26Q9BYN8 205 aaKnown RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 NAA50Q9GZZ1 169 aaKnown RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 SRD5A3Q9H8P0 318 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 DAZ1Q9NQZ3 744 aaKnown RBP5.46□□□□□ -1.54
PTPRF-210ENST00000463041 EXTL2Q9UBQ6 330 aa5.46□□□□□ -1.54
PTPRF-210ENST00000463041 C15orf62A8K5M9 175 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 F8W735 103 aaPredicted RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 INS-IGF2F8WCM5 200 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 GABARAPH6UMI1 98 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 TSPAN4O14817 238 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 NUPL2O15504 423 aaKnown RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 B3GALNT1O75752 331 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 CD74P04233 296 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 CMC4P56277 68 aaPredicted RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 PIGPP57054 158 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 TAS2R19P59542 299 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 MRPS10P82664 201 aaKnown RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 PRCDQ00LT1 54 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 RELQ04864 619 aaPredicted RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 Q56UQ5 140 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 STEAP1BQ6NZ63 245 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 BTNL8Q6UX41 500 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 GPR141Q7Z602 305 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 CCDC71LQ8N9Z2 235 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 ZNF114Q8NC26 417 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 TMEM190Q8WZ59 177 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 MRGPRFQ96AM1 343 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 SPAG8Q99932 426 aaPredicted RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 CHRDL1Q9BU40 450 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 COPZ2Q9P299 210 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 RABL2AQ9UBK7 228 aaPredicted RBP5.45□□□□□ -1.54
PTPRF-210ENST00000463041 RABL2BQ9UNT1 228 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 RYR2Q92736 4967 aa5.45□□□□□ -1.54
PTPRF-210ENST00000463041 LOC102724200A0A096LPH7 203 aaPredicted RBP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 IGHV3-21A0A0B4J1V1 117 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 A0A0B4J293 547 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 C3orf85A0A1B0GTC6 90 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 I3L2K1 104 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 CTDSP2O14595 271 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 CTDSPLO15194 276 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 RGS5O15539 181 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 RAB3DO95716 219 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 PI3P19957 117 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 ADMP35318 185 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 SNCAP37840 140 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 SUB1P53999 127 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 MEF2DQ14814 521 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 RNASE12Q5GAN4 147 aaKnown RBP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 ZFAND6Q6FIF0 208 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 UBAC2Q8NBM4 344 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 RRNAD1Q96FB5 475 aaKnown RBP5.44□□□□□ -1.54
PTPRF-210ENST00000463041 MISP3Q96FF7 219 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 TP53RKQ96S44 253 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 BCL7BQ9BQE9 202 aa5.44□□□□□ -1.54
PTPRF-210ENST00000463041 C20orf24Q9BUV8 137 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms