RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 RAB14P61106 215 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 GNG3P63215 75 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 AGTRAPQ6RW13 159 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 OR13C6PQ8NH95 151 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 GPR146Q96CH1 333 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 C20orf166-AS1Q96NR2 134 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 GINS3Q9BRX5 216 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 MED29Q9NX70 200 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 PYCARDQ9ULZ3 195 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 HHLA3Q9XRX5 114 aa1.95□□□□□ -2.1
GPNMB-205ENST00000463011 NEO1Q92859 1461 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 TRAV38-1A0A0B4J264 116 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 G3V2T6 193 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 BUB1B-PAK6H3BSN5 160 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 CIAO1O76071 339 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 IFNA10P01566 189 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 C1QAP02745 245 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 MSMBP08118 114 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 CSRP1P21291 193 aaKnown RBP1.94□□□□□ -2.1
GPNMB-205ENST00000463011 EVX1P49640 407 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 EIF2B2P49770 351 aaKnown RBP1.94□□□□□ -2.1
GPNMB-205ENST00000463011 HINT1P49773 126 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-205ENST00000463011 RHOBP62745 196 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 KISS1Q15726 138 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 SNCBQ16143 134 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 TAF9Q16594 264 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 BPIFA4PQ86YQ2 179 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 OR5J2Q8NH18 312 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 DNAJC9Q8WXX5 260 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 TIMM9Q9Y5J7 89 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 ROCK1Q13464 1354 aa1.94□□□□□ -2.1
GPNMB-205ENST00000463011 DENND4BO75064 1496 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-205ENST00000463011 LCTP09848 1927 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 TRAV7A0A075B6U4 112 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 IGKV3D-11A0A0A0MRZ8 115 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 TRAV4A0A0B4J268 109 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 IRGMA1A4Y4 181 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 RFPL4AA6NLU0 287 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 FNDC10F2Z333 226 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 RFPL4AL1F8VTS6 287 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 TRAPPC2LH3BP13 241 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 OR2J2O76002 312 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 C1QBP02746 253 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 PSMB8P28062 276 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 ATP5G3P48201 142 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 ZNF80P51504 273 aaPredicted RBP1.93□□□□□ -2.1
GPNMB-205ENST00000463011 CDC42P60953 191 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 NCALDP61601 193 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 RHEBQ15382 184 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 SPANXN3Q5MJ09 141 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 C3orf33Q6P1S2 294 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 Q6Q795 121 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 CLVS1Q8IUQ0 354 aaPredicted RBP1.93□□□□□ -2.1
GPNMB-205ENST00000463011 RASSF5Q8WWW0 418 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 MRPS24Q96EL2 167 aaKnown RBP1.93□□□□□ -2.1
GPNMB-205ENST00000463011 PCBD2Q9H0N5 130 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 PARVBQ9HBI1 364 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 SLC39A9Q9NUM3 307 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 TVP23BQ9NYZ1 205 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 UFC1Q9Y3C8 167 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 SIPA1L1O43166 1804 aa1.93□□□□□ -2.1
GPNMB-205ENST00000463011 MUC21A0A0G2JKD1 596 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 MUC21A0A140T8X8 626 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 C1orf196B1AJZ1 125 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 H0YJX3 145 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 C3orf84H3BNL1 204 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 J3QRK9 145 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 SLC22A1O15245 554 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 RPS4Y1P22090 263 aaKnown RBP1.92□□□□□ -2.1
GPNMB-205ENST00000463011 SERPINB1P30740 379 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 GNG5P63218 68 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 SUPT4H1P63272 117 aaKnown RBP1.92□□□□□ -2.1
GPNMB-205ENST00000463011 ZNF90Q03938 601 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 PABPC1L2AQ5JQF8 200 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 HCP5Q6MZN7 132 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 BRD3OSQ6XYD6 125 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 BIN3Q9NQY0 253 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 PRNDQ9UKY0 176 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 ERGIC3Q9Y282 383 aa1.92□□□□□ -2.1
GPNMB-205ENST00000463011 SLIT2O94813 1529 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 PRR14LQ5THK1 2151 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 A0A1B0GVG6 124 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 H7C2G1 150 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 MFSD11O43934 449 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 CBR1P16152 277 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 S100A4P26447 101 aaKnown RBP1.91□□□□□ -2.1
GPNMB-205ENST00000463011 CASP1P29466 404 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 SRIP30626 198 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 G6PCP35575 357 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 EMP1P54849 157 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 PIGPP57054 158 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 TCTAP57738 103 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 KRTAP10-8P60410 259 aa1.91□□□□□ -2.1
GPNMB-205ENST00000463011 TNFRSF9Q07011 255 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms