RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PEX7O00628 323 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 TM4SF5O14894 197 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 SPRY3O43610 288 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 SPINK4O60575 86 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 PROP1O75360 226 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV3-13P01766 116 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 IGHV3-7P01780 117 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 NPSP0C0P6 89 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 C3orf79P0CE67 100 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 IGLC2P0DOY2 106 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 IGLC3P0DOY3 106 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 HIST1H1EP10412 219 aaKnown RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CD33P20138 364 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CTRLP40313 264 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 KIR2DL2P43627 348 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 COMPP49747 757 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 GNG10P50151 68 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 SUB1P53999 127 aaKnown RBP eCLIP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 PRRX1P54821 245 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 KLF3P57682 345 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 SELENOVP59797 346 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 UBE2G1P62253 170 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ERHP84090 104 aaKnown RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 HOXA4Q00056 320 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 KLF5Q13887 457 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 C17orf58Q2M2W7 97 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 KIAA1644Q3SXP7 199 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 TDRG1Q3Y452 100 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CT45A1Q5HYN5 189 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 RNFT1Q5M7Z0 435 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ATP1A1-AS1Q5TC04 95 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 C10orf113Q5VZT2 155 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 RNASEKQ6P5S7 137 aaKnown RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 VWA1Q6PCB0 445 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 FAM231DQ6ZW35 169 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 TMPRSS7Q7RTY8 843 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ATP5L2Q7Z4Y8 100 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 Q8N976 141 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CT45A3Q8NHU0 189 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ORAOV1Q8WV07 137 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CACNG8Q8WXS5 425 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 LEAP2Q969E1 77 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 OR2V2Q96R30 315 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 PAXXQ9BUH6 204 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ARRDC1-AS1Q9H2J1 176 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 GAL3ST2Q9H3Q3 398 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF430Q9H8G1 570 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 BET1LQ9NYM9 111 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 RNF7Q9UBF6 113 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 LAMTOR2Q9Y2Q5 125 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 AMMECR1Q9Y4X0 333 aaPredicted RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 EXPH5Q8NEV8 1989 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 GOLGA4Q13439 2230 aaKnown RBP2.88□□□□□ -1.95
COL8A1-204ENST00000462604 CACNA1CQ13936 2221 aa2.88□□□□□ -1.95
COL8A1-204ENST00000462604 MKI67P46013 3256 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 LAMA3Q16787 3333 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 PHF3Q92576 2039 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 KIAA0100Q14667 2235 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TRAV9-2A0A087WT02 112 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TEX50A0A1B0GTY4 177 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 hADV38S2A0JD32 116 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 FAM181BA6NEQ2 426 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 AHRRA9YTQ3 701 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 INS-IGF2F8WCM5 200 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 M0R1B8 84 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 M0R2Z0 102 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SIAH2O43255 324 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TCF21O43680 179 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 HYPMO75409 117 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 HSBP1O75506 76 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 OR2J3O76001 311 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 IGLV2-8P01709 118 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SAA1P0DJI8 122 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CT45A6P0DMU7 189 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CT45A5P0DMU8 189 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CT45A7P0DMV0 189 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CGB3P0DN86 165 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CGB7P0DN87 165 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 RNASE2P10153 161 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CD59P13987 128 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 MYOD1P15172 320 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TSPOP30536 169 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CA7P43166 264 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 GATA4P43694 442 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF83P51522 516 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ZNF134P52741 427 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 MFAP2P55001 183 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 RPL8P62917 257 aaKnown RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 HBBP68871 147 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 SLC35B1P78383 322 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TNFAIP6P98066 277 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CD69Q07108 199 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 TBR1Q16650 682 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 C3orf36Q3SXR2 165 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 ANKRD39Q53RE8 183 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 HES3Q5TGS1 186 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 CYB5R2Q6BCY4 276 aa2.87□□□□□ -1.95
COL8A1-204ENST00000462604 FAM71F2Q6NXP2 309 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms